Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq5 215 4e-50
seq2 125 5e-23
seq223 107 1e-17
seq631 100 2e-15
>seq5
Length=8875486
Score = 215 bits (238), Expect = 4e-50
Identities = 943/1475 (64%), Gaps = 19/1475 (1%)
Strand=Plus/Plus
Query 281431 CACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCT 281490
|||||| ||||| ||||||||||| | || || || || || | || ||||| ||||
Sbjct 3524279 CACATTCAGAATTCCATTGGCATCAATGTCGAAGGTTACCTCCACCTGTGGGACACCTCG 3524338
Query 281491 CTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAA 281550
||||||| ||||| ||| | | ||| | || || || || || || || |
Sbjct 3524339 GGGAGCAGGAGGGATACCTGTGAGCTCAAACTTGCCGAGGAGGTTGTTGTCCTTGGTCAT 3524398
Query 281551 TTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGT 281610
|| |||||||| | | || || || | | || ||||||||||| || |
Sbjct 3524399 GGCTCTCTCACCCTCATACACCTGAATCAGCACACCTGGCTGGTTATCTGAATATGTAGA 3524458
Query 281611 AAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAA 281669
|| | ||||| | | || || || || ||||||| | || | | |||||||
Sbjct 3524459 GAAGA-TCTGGGTCTGCTTGGTGGGGATGGTGGTGTTTCGTTTGATTAAAGGTGTCATAA 3524517
Query 281670 TACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTT 281729
||||| || || || | || ||||| ||||||| ||||| | || | | || ||
Sbjct 3524518 CTCCACCTGCAGTCTCAATGCCCAGAGACAGAGGAGCCACATCCAGCAGTAGCAAATCTT 3524577
Query 281730 GAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAA 281789
| | ||||| ||| | ||| | || ||||| || || | || |||||||| || |
Sbjct 3524578 GGACATTTTCTGAAGTGTCACCCATCAGGATAGCAGCCTGGACTGCTGCACCATAGGCCA 3524637
Query 281790 CAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT-TGAAAGA 281848
|||||||||| || || | | | || | || | | ||||| ||||| | || ||||
Sbjct 3524638 CAGCTTCATCTGGGTTGATGCTCTTGTTCAATTCTCTGCCATTAAAAAAGTCCTGCAAGA 3524697
Query 281849 AGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGT 281908
|| | | || ||||| | | || || ||||| | || |||||||| | ||
Sbjct 3524698 GCTTCTGG-ATTTTGGGAATTCTTGTGGAGCCACCAACCAGGACGATTTCATGGATCTTG 3524756
Query 281909 GATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAAC 281968
|| |||||||| || | ||| | | || ||||| || || || | || ||
Sbjct 3524757 GACTTATCCAGCTTGGCATCTTGCAGAGACTTCTCAACTGGATCCAGTGTTCCCCTGAAG 3524816
Query 281969 AAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTC 282026
| ||||| || || || || || || || || ||| | || || || || |
Sbjct 3524817 AGCTCTGAGTTGAGCTCCTCAAAGCGTGCCCTTGT--GATTGAGGTGTAGAAGTCGATAC 3524874
Query 282027 CTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAG 282086
| || |||| ||| |||| |||| ||| || || || || || | | || |
Sbjct 3524875 CCTCAAACAGAGAGTCAATCTCAAGGCTAGCCTGGGTGCTGGAGGACAGGGTCCTCTTTG 3524934
Query 282087 CACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT--GATTCAAATCTGT 282144
| | |||||| || || | ||||| | | ||| | || ||| | | | || |
Sbjct 3524935 CTCTTTCACAAGCAGTGCGCAGTCTCCTCACTGCTCT--CTTATTTTGGCTGATGTCCTT 3524992
Query 282145 TTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTC 282204
|| | |||||| || || || || ||| | | || | || || ||||| || ||
Sbjct 3524993 CTTGTGTTTTCTTTTAAATTCCTCTACAAAGTGGTTGACCATCCGGTTGTCAAAGTCCTC 3525052
Query 282205 ACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGA 282264
|| || | | || | |||| || | | | |||| |||| || ||||||| |
Sbjct 3525053 CCCACCAAGATGTGTGTCGCCTGCAGTGGATTTCACTTCAAAAATGCCGTCTTCAATGGT 3525112
Query 282265 CAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT-CATTTCTT 282323
|| | | || ||| ||| || ||||| | |||||| || || || || | | |
Sbjct 3525113 CAGGATGGACACGTCAAAGGTGCCTCCACCGAGATCAAAGATGAGCACGTTGCGCTCCCC 3525172
Query 282324 TGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTC 282383
| | || ||| ||| || || || || | || || || || || ||||| || || |
Sbjct 3525173 TCTTTTACCTTT-ATCCAGGCCGTAGGCGATGGCTGCTGCTGTGGGCTCATTTATGATCC 3525231
Query 282384 TCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGT 282443
||| |||||| || |||| || || || || || |||||||| || || || || |
Sbjct 3525232 TCAGAACATTCAGTCCAGAGATCACCCCAGCGTCCTTGGTGGCTTGCCTCTGGGAGTCAT 3525291
Query 282444 TAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTG 282503
||||||| || ||||| || || || || | || |||| || ||| | || || |
Sbjct 3525292 TAAAATAAGCTGGAACTGTGATGACTGCGTTTGACACTTTTTGTCCCAGGTAGGCTTCAG 3525351
Query 282504 CTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGG 282563
| | | ||||||||| | | ||| || || |||| |||||| | | | |||| |
Sbjct 3525352 CGATCTCCTTCATTTTAACCAGGACCATGGAGGAGATTTCTTCTGG-GTAGAAGGCTTTG 3525410
Query 282564 AT-TCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAAT 282622
| || || ||| || | | | ||||| | | |||| || ||||| ||
Sbjct 3525411 GTCTCCCCTTTATACTCAACCTGGACTTTGGGTTTTCCGCTATCATTGATCACTTTGAAG 3525470
Query 282623 GGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGT 282682
||||| ||||| || || || ||| |||| |||| | ||| || || | |
Sbjct 3525471 GGCCAGAGCTTCATGTCAGACTGGACAACAGGGTCGGTAAACTTTCTCCCGATGAGCCTC 3525530
Query 282683 TTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCA 282742
|| |||||||| || || ||| || || | ||| | |||| ||||| |||||||||
Sbjct 3525531 TTGGCATCAAAGATTGTGTTGACGGGGTTCATGGCAACCTGATTCTTGGCAGCATCTCCA 3525590
Query 282743 ATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCA 282802
|| || ||||| || ||||| | ||||| ||||| || | || || || ||
Sbjct 3525591 ATGAGCCTCTCTGTGTCAGTAAAGGCCACATAGCTGGGAGTGGTTCTGTTTCCCTGGTCG 3525650
Query 282803 TTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCT 282862
|| || || || || ||||| |||| || | || || |||||| | | || || ||
Sbjct 3525651 TTGGCGATGATCTCCACTTTGCCATGCTGGAAAACCCCGACACAAGAATAGGTGGTGCCC 3525710
Query 282863 AAATCAATACCAATAGCAAT---TTTATCTGACAT 282894
| |||||| ||||||| || |||| |||||||
Sbjct 3525711 AGATCAATGCCAATAGATATTCCTTTAGCTGACAT 3525745
>seq2
Length=11018341
Score = 125 bits (138), Expect = 5e-23
Identities = 113/142 (80%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
||||| || || ||||| |||| || ||||||||||| ||||| || || | || |||
Sbjct 7191316 TTTTTGTCCAGGCCATAAGCAATGGCTGCAGCAGTTGGCTCATTGATGATGCGCAGCACA 7191375
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
||||| |||||||| |||| ||||||||||||||||| | || || || || || ||
Sbjct 7191376 TTAAGCCCAGCAATGGTTCCAGCATCTTTAGTGGCTTGACGCTGGGAGTCATTGAAGTAA 7191435
Query 282452 GCAGGAACAGTAATAACGGCAT 282473
|||||||| |||||||| ||||
Sbjct 7191436 GCAGGAACTGTAATAACTGCAT 7191457
Score = 95.1 bits (104), Expect = 9e-14
Identities = 111/150 (74%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 281416 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 281475
||| ||| | |||| ||||| ||||| ||||||||||| | ||||| || || |||||
Sbjct 7190093 TTTGTCAACTGCAGATACATTGAGAATGCCATTGGCATCAATGTCAAAAGTCACCTCAAT 7190152
Query 281476 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 281535
|||||||| ||||| | |||||||| || || || | |||| | |||||| ||||
Sbjct 7190153 CTGAGGGACACCTCTGGGTGCAGGTGGAATACCAGTCAGCTCAAATTTGCCCAGAATATT 7190212
Query 281536 ATTATCTTTAGTGAATTTTCGTTCACCCTC 281565
||| || || || | || |||||| ||
Sbjct 7190213 ATTGTCCTTGGTCATGGCTCTTTCACCTTC 7190242
>seq223
Length=448970
Score = 107 bits (118), Expect = 1e-17
Identities = 113/149 (76%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
||||| || || ||||| |||| ||||||||||||||||||||| || || | || |||
Sbjct 201850 TTTTTGTCGAGGCCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATGATACGCAGCACA 201909
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
|| || |||| ||| | ||||||||||| || || || | || || || || || ||
Sbjct 201910 TTCAGCCCAGAAATGGTCCCTGCATCTTTGGTAGCCTGGCGCTGAGAGTCATTGAAGTAG 201969
Query 282452 GCAGGAACAGTAATAACGGCATCTGTTAC 282480
||||| ||||| | || |||| |||||
Sbjct 201970 GCAGGCACAGTCACTACAGCATTAGTTAC 201998
>seq631
Length=169947
Score = 100 bits (110), Expect = 2e-15
Identities = 104/135 (77%), Gaps = 1/135 (1%)
Strand=Plus/Plus
Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403
||||| |||| ||||||||||||||| ||||| || || | || ||| || || ||||
Sbjct 157153 CCATAAGCAATAGCAGCAGCAGTTGGCTCATTGATGATACGCAGAACGTTGAGGCCAGAG 157212
Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463
||| |||| ||||| |||||||| || | || || ||||| || || || || || |||
Sbjct 157213 ATTGTTCCAGCATCCTTAGTGGCCTGACGCTGGGAGTCGTTGAAGTAGGCGGGTACCGTA 157272
Query 282464 ATAACGGCATCTGTT 282478
|| || |||| ||||
Sbjct 157273 ATTACAGCAT-TGTT 157286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740321391198444
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |