Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq151 120 4e-22 >seq151 Length=622973 Score = 120 bits (132), Expect = 4e-22 Identities = 242/353 (69%), Gaps = 7/353 (2%) Strand=Plus/Plus Query 176946 GCCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAA 177005 ||||| || | || || ||| |||||| |||||| ||||| ||||||||| ||| | Sbjct 114852 GCCAGCTCCTTGGGCGAGGTGAAGTCGTCCACGTGGATGAAGGCGTCTCCCTGGATAAAG 114911 Query 177006 TTTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATA-AGAGA 177064 || ||||| |||| || | | ||||| || | || || | || | || | || | Sbjct 114912 TTCTCGTAGTTCTGCCTGGGCGGGCCGAGAACCACTGGCACTGTCCC-GACAGAGAGTGG 114970 Query 177065 TCGGTAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAGAA 177124 ||| |||||||| ||||| |||||| |||| | |||||||||||| || || ||||| Sbjct 114971 GTTGTACAGTTTTTCAGTAATGTAGTCCTTGTGGATGGAGTTCTCAAAAGCCAGGTAGAA 115030 Query 177125 TTTACAG--GAAGATAGTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTACTACG 177182 |||||| | ||| || |||| | |||| | || | || || || || | | Sbjct 115031 CTTACAGCTGGCGATGGT--GGGGAAGTAGTCTTGGTCAGAGATGTATTCCCCGAAGGCT 115088 Query 177183 TTCCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGATCTCACG 177242 | || || | || | || |||||||| ||||| |||||| || | |||| Sbjct 115089 TGTCCATACGCGTGAACCTCAATGTGTTTGTACAGCTCATTGTAGTACTTCACCCGCACG 115148 Query 177243 TGGTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTTTGCGGG 177295 ||||| | |||||| ||||| || | |||||| | | |||| | ||||| || Sbjct 115149 TGGTCCTGGTTCCAGTTGCTCACAATCCAGCAGATCAGCTTG-TTTTTGCTGG 115200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578386491862400