Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_025115.1
Length=40002
Score E
Sequences producing significant alignments: (Bits) Value
seq2742 123 6e-24
>seq2742
Length=6849
Score = 123 bits (136), Expect = 6e-24
Identities = 734/1168 (63%), Gaps = 77/1168 (7%)
Strand=Plus/Minus
Query 8894 ATGGACATGAACGACGCGGCGAAGTCCGCCCAGCCGGCGTCGAACTCCAGCCGGCCCTTG 8953
|| |||| ||||| ||| |||| || | ||| ||||| || | || | || ||||
Sbjct 2264 ATCGACAGGAACGCCGCCGCGACCTCGGTCCAACCGGCATCCCATTCGATGCG---CTTG 2208
Query 8954 CT---GATCACGTCGTGCGCCTTGAGCACCAGGGCGGTTTTCACTTCCACGGAATAGGTG 9010
| ||||||||| || ||||||||||||||||| | ||| | |||| | || |||
Sbjct 2207 CCCTGGATCACGTCCTGGGCCTTGAGCACCAGGGCATTCTTCGCCTCCAGGCTGTA-GTG 2149
Query 9011 AAGCCTTCGGCGT---CCGGGCG--GAACTTCTGCACCAGGCGGAACACCGCATCGCCGA 9065
|| |||| || ||||| | ||| | | ||||||| ||||||| | | ||||
Sbjct 2148 AA----TCGGAGTAGCCCGGGGGAAGAAGTCTTTCACCAGGTCGAACACCCCGTAACCGA 2093
Query 9066 TGCCGGTCCGGTCGATGCCCACGTAGGCGACGTTGTAGCGCTCAGTGACGCGCCGGATGG 9125
|||||| ||||||||| | || ||||||| ||||||| | | |||
Sbjct 2092 CGCCGGTAATGTCGATGCCGATGTGCTGGACGTTGAAGCGCTCGCACAGCTTCTCGATCT 2033
Query 9126 CGCCGGCCTGTTCCTCGTA-GTCGATGCCGCGGAACTGGTGCCGCTCCAGCACGCGGAAC 9184
||||| | | | | | || | || || | |||| |||||| | ||||||
Sbjct 2032 GCTTTGCCTGATGCGTGAACGACG-TCCCCCGCCAGCTGTGCTTCTCCAGGATTCGGAAC 1974
Query 9185 TTGCCGCCCGGCACCAGGGGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 9244
|||||||||||| ||||||||||
Sbjct 1973 TTGCCGCCCGGCTCCAGGGGCGGGGCAACGACAACGCACGTCGCGTCGTCGCGGGTTCGA 1914
Query 9245 NNNTTGGGGTCGTAGCCGACCCACACCGGCCGGTTGCCGAACGGCCGCGGCGCGAACGGC 9304
||||||| || |||| ||| ||||| |||||| ||||||||||||| | |||
Sbjct 1913 C---TGGGGTCATACCCGAGCCAGACCGGGCGGTTGTCGAACGGCCGCGGGCTGTCCGGG 1857
Query 9305 CGGAAGTCCTCCCATACTTCCCAGGT--GTCCACCATCCCGCGCATGAGCATCGAGAGCG 9362
| |||| ||||| |||| || | | || | | | || | || || |||
Sbjct 1856 TCGTAGTCAGTCCATA-GGCCCAAGTCGGAATAGCAGCGCTC-CAGGTCGGTCAAG-GCG 1800
Query 9363 GAAACACGGACGCGTTGTCGTCGATGAACGCGCACATCAGCAGGTTGGCGAAATCGAGTT 9422
|| | | | | || |||||||||| |||||| | ||| | |||| ||
Sbjct 1799 --AATGCAGCCTGGGTGCTGTCGATGAACTTGCACATGAACAGCTGTTCGAAGCGCTCTT 1742
Query 9423 CGCTGTACTCCAGCCGCAACTGGTCGATGTCGAACAGGTTGCAGCCGCCGCGCAGCGCGT 9482
|| |||||||||| ||| | || | |||||||||||||||||||||| | ||||
Sbjct 1741 CGTCGTACTCCAGCTGCAGGCGCTCCAGGTCGAACAGGTTGCAGCCGCCGGCGATGGCGT 1682
Query 9483 CCTCTACCGTCACGATCTGGCGCCACTGACCGTCAGCGCA----GC----GCATGCCGTT 9534
| | | ||| | || || ||||||||| ||||| | ||| || ||||| |
Sbjct 1681 CTTGAATCGTGATGACCTTGCGCCACTGCCCGTCCGGGCACAACGCGCCGGCATGGATCT 1622
Query 9535 GCGCAGCGCGGTGTGGCTCACGTCGATCTTGACCTGTTTGTCCTTGGCCTTGCCGCGGTT 9594
|||| ||| ||| |||| | | ||| | | ||| | ||||| | |
Sbjct 1621 GCGCTTCGC----TGGGCCACG----GCCCGGCCT-TCTTTCC--GCGCTTGCTGTTGCG 1573
Query 9595 GAACAGTGCGCCGGACCAGAACGGGTAGGCCTCATGCG---ACAAGCTGGACGGCGTGGA 9651
|||| |||||| |||| |||| || |||| |||| | |||| ||||||||
Sbjct 1572 GAACTCCTCGCCGGTCCAGTACGGATATGCCTGGTGCGTTACCGCGCTG---GGCGTGGA 1516
Query 9652 GAAGTACGTTTGCCGCCAGTGCTTG--TGGATCGCCATGCCGGACGCGACCTTGCGCAGT 9709
|||||| || | ||||| | ||| || ||||| || || ||| | ||||
Sbjct 1515 GAAGTAGGTCAGGCGCCACT--TTGCATGCGAGGCCATCGCGCTGGCCACCGTCTGCAGC 1458
Query 9710 TCCTGGAAGCGCGGCACCCAGAAGTACTCGTCGAAGTACAGGTTGCCGTGGTAGCTCTGC 9769
| |||||| || | |||||| ||||||| ||| | || ||||||||||||||||
Sbjct 1457 TTCTGGAAATTGGGGATCCAGAACACTTCGTCGATGTAGACGTGGCCGTGGTAGCTCTGC 1398
Query 9770 GCGGTGCGGGCGTTGGTCCCGAGGAAGTACAGCGTCGCCC------------CGTTGGGC 9817
|| ||| | ||| ||| ||| || ||| ||||| | ||| |
Sbjct 1397 GCCGTGTTGCTGTTCGTCGAGAGAAACCGCAGTTCCGCCCACGGCTTGCCGTCTTTGCTC 1338
Query 9818 AACACCATCGGGTCGCCCTTCAGCTCGACGCCGGCTGCGTCCTTCGCGAATTGGATGATG 9877
|| | || || | ||| |||||||| || | | ||||| || ||||
Sbjct 1337 AAGATGATGGGATTGCCGGACAGCTCGATATCGAACCATTGCGCGGCGAACGCGACGATG 1278
Query 9878 TA-CTGCTTGAAGACGTGCGCCTGTGCCTTGCTGGCCGATAGAAAAATCTGGTTGCGGCC 9936
|| |||| ||| || | | ||| || ||| || || || |||||||||||| ||
Sbjct 1277 TAGCTGC-GGAACACTTCGGACTGGGCGCGGCTCGCGGACAGGAAAATCTGGTTGTCCCC 1219
Query 9937 AGTGGTCAGC---GCGTCGATGAACGCCTCGCGTGCGAAGTACCACGTCGCGCCGATCTG 9993
||||||| ||||| |||||||| ||| |||||||| | ||| ||||||||
Sbjct 1218 ---GGTCAGCACTGCGTCCATGAACGCTTCGGCGGCGAAGTAGTAGGTCAGCCCGATCTG 1162
Query 9994 CCGGCTCTTGAGCAGGTTGCGGATGCGC 10021
|| ||| || | | |||||| |||
Sbjct 1161 GCGCGACTTCAGGATATGGCGGATCCGC 1134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127875241730192
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