Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_025430.1 Length=42351 Score E Sequences producing significant alignments: (Bits) Value seq120 114 3e-21 >seq120 Length=812315 Score = 114 bits (126), Expect = 3e-21 Identities = 215/312 (69%), Gaps = 8/312 (3%) Strand=Plus/Minus Query 215 CGGCCATTCAT---GCCCACCACGATTTCAGTTGTGTAGCGATCAACGCCAGCCTGGTCC 271 |||||||||| | | || ||||| || || |||||||| | || || | | ||| Sbjct 48478 CGGCCATTCACCTGGTCGACGACGATCTCGGTGGTGTAGCGTTTCACTCCGTCTTTTTCC 48419 Query 272 TGCCACTTGCGCGTTTGCAGCGCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTAC 331 |||| ||| || | || | |||||| | | | || ||| ||||| ||||| ||| Sbjct 48418 ---CACTCGCGGGTGCGGAGAGTGCCTTCGACGTAGCACTGGCTCCCTTTTCGCAGATAC 48362 Query 332 TGGCTGGCGATTTCTGCCAGCTTTCCGAAGATGACCACGCGGTGCCATTCCGTTTTTTCT 391 | | |||||||| || | ||| ||||||| || ||||||||||| || || || Sbjct 48361 TCACCCGCGATTTCGGCGATCTTGCCGAAGAACACTACGCGGTGCCACTCGGTACGCTCC 48302 Query 392 TTCTTCTCCCCTGTCTGCTTATCCTTCCAGGTTTCAGACGTGGCAATTGATAACTGCGCC 451 | || || || ||||||||||| |||||| |||| ||||| | | || | || Sbjct 48301 TGCTGCTGGCCGGTCTGCTTATCTTTCCAGCTTTCGCTGGTGGCCAGGGTTATGTTCGTT 48242 Query 452 ACGCCGTTGCCGTTCGGCAGCGT-GCGGAATTCTGGATCGTTGCCTAAGTTGCCAATGAT 510 ||| ||||||||||||| | || ||||| ||| || ||| ||| |||||| | || Sbjct 48241 ACGGCGTTGCCGTTCGG-GGTGTAGCGGACTTCCGGGTCGCCGCCGGCGTTGCCGACGAG 48183 Query 511 TTCTACTTTGTT 522 |||||||| Sbjct 48182 AATCACTTTGTT 48171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135391479915164