Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq67 199 4e-46
seq30 86.0 6e-12
>seq67
Length=1635559
Score = 199 bits (220), Expect = 4e-46
Identities = 878/1364 (64%), Gaps = 52/1364 (4%)
Strand=Plus/Minus
Query 147042 GATGTTGTCCTTCAA-AGTTTGCCAGTCCCACA--TCGACGAGGGCGTCACGTTCCACAT 147098
||| || ||||||| || || ||||||| ||| ||| | ||||||| | ||||||
Sbjct 33221 GATCTTTTCCTTCAGCAGCTT-CCAGTCCAACAGATCG--GTGGGCGTCTTCTCCCACAT 33165
Query 147099 GTCGTACTGGAGCA-CTCCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGT 147157
|||||||||||| | | ||| | ||| | ||| ||| || |||| |||| |||
Sbjct 33164 GTCGTACTGGAGGATCCCCTTG-CTGACCGGAGAGCCTTCGTACGTCTCGTAGGGGCCGA 33106
Query 147158 CGCGCTGCG-CCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATT 147216
|| | ||| ||| || ||||| ||||| || || | ||||| ||||| || ||||
Sbjct 33105 -GCTCAGCGGCCAGCTCGCAGCTCGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATT 33047
Query 147217 TGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCA 147276
|| |||| || | ||| || ||| || | || ||||| || | ||||||
Sbjct 33046 TGGATGTTCAGCAGCTGCGCCTCGGGGCTTTCAAACGGGTAACGCATCAGGATGAAGGCA 32987
Query 147277 TCGGCCAAACCCTGGATACCGACGCCGATAGGTC---GATGCTTTTCGT--TGCTGCGCT 147331
|| |||||||| || | |||| || || || | || |||| | | | || ||||
Sbjct 32986 TCCGCCAAACCTTGAACGCCGATTCCTATTGGCCTGTGACGCTTGTTGGACTTCTCCGCT 32927
Query 147332 TCGCGCTCGCTATGGGATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAA 147391
||| || | |||||| ||| || || |||||||| | ||| | || | |
Sbjct 32926 TCGGGCACT-----GGATAGAAGTTAATCTCGATGATCTTGTTCAAGTTTCTGACAATGA 32872
Query 147392 CTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGTCCCGTCTTCGAC-ACGTACGCAT 147450
|||| || | | | ||||| | || ||| |||||| || | |||||| ||
Sbjct 32871 CTTTGGTCACAGATGCTAGTTTTTTAAAGTCAAAAGTCCGCTCAGGGGTGACGTAC--AT 32814
Query 147451 TGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGC 147510
||| | || || || |||||||| ||||| || ||| ||| || | |||| |
Sbjct 32813 --GTTGAGCGCAATGGAGGCCAGATTACAGACCGCTACCTCATCGTCGCTGGTGTATTCA 32756
Query 147511 ACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTC 147570
|||||||| | ||| |||||||||| ||| || |||| ||| ||||| ||||| ||
Sbjct 32755 ACGATTTCTGTGCAGAGGTTGCTGCTTTTGATTGTGCCCAGATTCTGCTGGTTGCTCTTT 32696
Query 147571 CGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACG 147630
|| ||||| ||||||||| | ||||||||||| ||||| || || | |||| |
Sbjct 32695 CGGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCGGTTTCTGTCTGGGACTCAATG 32636
Query 147631 AT--------AAACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGT 147682
|| | ||| ||| | ||| | | ||| |||| || | ||||| |
Sbjct 32635 ATGGCGTGCCACACC--TGCTGAGCCTTCAC---CACACGCT--TGA-CCCTCCCCTCCT 32584
Query 147683 TTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGAC 147742
| || || ||| | | ||||||||| || || | || ||| | || |||||||
Sbjct 32583 TCTCATATGAAGTGTAGAGCTTCTCAAACTCCTCACCCCAACACTCGTCCAGCCCGGGAC 32524
Query 147743 ACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTT-AACGCGTCGCATAAACAGA 147801
||| || ||||||||||| ||||| | | | || || || | ||| ||||
Sbjct 32523 ACTCATTGGGACACATCAGAGACCA-GTCTTGGTTGCTTTCCACTCTCTTCATGAACAAG 32465
Query 147802 TCCGGCACCCACAGCGCGTACATAAGATCGC--GCGCTTTGCAATCCTCGGCGCCCATGT 147859
|| || | |||||| ||||| | ||| || | || || ||| ||||| || |||
Sbjct 32464 TCAGGGATCCACAGGGCGTAGAAAAGGTCTCTGGCCCTCTGC--TCCTCCTTTCCTGTGT 32407
Query 147860 TGCGTTTCAAATTAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCA 147919
| |||| | || | | | | | ||| |||||| || || | ||| | ||| |
Sbjct 32406 TCTTCTTCAGCTCCAGGAAGTCAAACACATCGAAGTGCCACGGCTCCAGGTACATGGCGA 32347
Query 147920 GCGCACC---TTTACGCTTTCCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGC 147976
|| || | | || |||||||||||||||| ||| || ||||||| | || |
Sbjct 32346 AGGCTCCGGGTCTTTTGTTGCCGCCCTGGTCGACATAACGCGCCGTGTTGTTGTAAACTC 32287
Query 147977 GCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGG 148036
|| |||||| | | ||| | | ||||||| ||| || | ||| || |
Sbjct 32286 TCAGCATGGGGACTAACCCGTTTGAGTTGCCGTTTGTGCCGGCAATGTAGCTCCCTGTTG 32227
Query 148037 CTCGCACTTCGTGCACGTTAACGCCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAA 148095
|| | | || || || || || || |||| ||||||| ||| || ||
Sbjct 32226 ATCTGATGCAGCTGACAGCCACACCGATTCCTCCAGCCG-ACTTTGAGATGAGGGCACAC 32168
Query 148096 TCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACAC 148155
| || || ||||||||| ||||||||||||| || | | | |||| || ||
Sbjct 32167 TGCTTCAGAGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGCGAGCAGGAAGCAG 32108
Query 148156 GAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAAC 148215
||| || || | || || || ||| || || || ||||| || |||
Sbjct 32107 CTGGACAGCTGAGGCCTGTTGGTACCGGCATTGAAGAGAGTAGGCGAGGCGTGGGTGAAC 32048
Query 148216 AATTTTTGACTCATCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATG 148275
| || | || || | || |||||||| || | |||||||| | ||| |||
Sbjct 32047 CACTTCTCCGACAGCAGGTTGTAGGTCTCAATGGCTGCGTCGATGTCCGTTCTGTGGATG 31988
Query 148276 CCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTG 148335
|| | | || | ||||||||||||||| ||||||||||| |||| |||||||||
Sbjct 31987 CCAACAGAAACCCTCATGAGCATGTGCTGGGGTCGTTCGGCCACTTTGCCGTTGATCTTC 31928
Query 148336 AGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGTACTTGTA 148379
|| || || || || || ||| | |||||| | |||||
Sbjct 31927 AGCAGGTAGGACCGCTCCAGAGTCTTGAAGCCAAAGAAGTTGTA 31884
>seq30
Length=3550406
Score = 86.0 bits (94), Expect = 6e-12
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 147503 TGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGAT 147562
|||||| ||||| || | ||||||||||||| |||| ||| |||| || ||||| |
Sbjct 773352 TGTACTCTACGATCTCTGTGCACAGGTTGCTGGATTTGATGGTGCCCAGGTTCTGCTGGT 773293
Query 147563 TGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602
|||| |||| |||||| || || ||| | |||||||||||
Sbjct 773292 TGCTCTTCCCATTGCAGGCATCCTTGTAAAGCATGTACGG 773253
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476573702613840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |