Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq95 149 7e-31 >seq95 Length=1145539 Score = 149 bits (164), Expect = 7e-31 Identities = 139/177 (79%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || || || | ||| || | ||||||||| || || | |||||||| || ||||| Sbjct 863716 CTTGAGTCCTGTGATGTGTGCGATCATGTAGGTAAGAAGTGCATAGCTGGCGATATTGAA 863657 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || ||||| |||||||| || || || | |||||||||||| ||||| ||||| || || Sbjct 863656 AGGCACCCCGAGGCCCATATCACCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCATC 863597 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTC 147158 | |||||| ||||| |||||| |||||| || ||||| |||||| ||||||||| Sbjct 863596 GCACACGTAGAACTGACACAGGGCGTGGCAGGGGGGCAGAGCCATGAAGGGCAGGTC 863540 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/140 (75%), Gaps = 6/140 (4%) Strand=Plus/Minus Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342 || |||||||| |||||||||||||| ||||| || ||||||||||| || ||| | Sbjct 862993 GCACCAAAGTGTCTCCACTGGAAGCCATACACGGGTCCCAGGTCGCCTTCCTCTCTATCT 862934 Query 147343 GAGAAGCCCGCCCGCTTG---AGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACT 147399 | ||| |||| | ||| || || || | ||||||| ||||||||| || |||| Sbjct 862933 GTGAA-CCCG--AGATTGTCCAGGAAGTCTCGAGACCCGTTGGCGTCCCAAATCTTCACT 862877 Query 147400 CCCTTGGCGGAGAGCTCCTT 147419 || || | ||||||||||| Sbjct 862876 CCTTTCTCAGAGAGCTCCTT 862857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583442094081600