Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq331 104 2e-17 >seq331 Length=323222 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| || |||| | ||| || | || ||||||||||| || ||||| Sbjct 7509 CTCCTTCTGGATGTTATAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 7568 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | |||| || ||||| ||| |||||| ||| | | Sbjct 7569 GATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTT 7628 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||||| ||||| || || || || | || || || Sbjct 7629 CTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 7688 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 7689 AAAGATCTGCAT 7700 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | ||| || | || ||||||||||| || ||||| Sbjct 7737 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAA 7796 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | |||| || ||||| ||| |||||| ||| | | Sbjct 7797 GATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTT 7856 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | || ||||| | ||||| || || || || | || ||||| Sbjct 7857 CTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 7916 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 7917 AAAGATCTGCAT 7928 Score = 96.9 bits (106), Expect = 3e-15 Identities = 131/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 35558 TTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGC 35617 ||||| |||| | ||| || | || ||||||||||| || ||||| |||| || |||| Sbjct 12929 TTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGC 12988 Query 35618 TGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTC 35676 ||||| | |||| || ||||||||| ||| ||| | ||||| | | | | ||||| Sbjct 12989 TGGTCAGGGGGAATGCCTTCCTTGTCC-TGAATTTTAGCCTTCACATTCTCAATGGTGTC 13047 Query 35677 GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | || ||||| | ||||| || || || || | || || ||||| |||||||| Sbjct 13048 GCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAAATCTGCAT 13107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450758133813520