Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq67 140 3e-28
seq331 100 3e-16
seq30 84.2 2e-11
>seq67
Length=1635559
Score = 140 bits (154), Expect = 3e-28
Identities = 896/1427 (63%), Gaps = 26/1427 (2%)
Strand=Plus/Plus
Query 7524 CTACTTGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGT 7583
|||| || |||| ||||||||| || || |||||| || |||||||| || | ||
Sbjct 31919 CTACCTGCTGAAGATCAACGGCAAAGTGGCCGAACGACCCCAGCACATGCTCATGAGGGT 31978
Query 7584 GGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTC 7643
| || ||||| ||| | ||||| ||||| ||| | || || ||| | || ||||
Sbjct 31979 TTCTGTTGGCATCCACAGAACGGACATCGACGCAGCCATTGAGACCTACAACCTGCTGTC 32038
Query 7644 TTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCA 7703
||| ||| || ||||| ||||| || | || || || || ||| ||||||
Sbjct 32039 GGAGAAGTGGTTCACCCACGCCTCGCCTACTCTCTTCAATGCCGGTACCAACAGGCCTCA 32098
Query 7704 ATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACAC 7763
||||| || || |||| ||||| || ||||||||||| ||||| ||| ||||
Sbjct 32099 GCTGTCCAGCTGCTTCCTGCTCGCCATGAAGGACGACAGCATCGAAGGCATCTACGACAC 32158
Query 7764 GCTGCGCGATTGCGCCAATATTTCCAAATACGGC-GGCGGAATAGGTCTGAACGTAAACG 7822
||| | || ||| || | |||| |||| || ||||| ||| || || | |
Sbjct 32159 TCTGAAGCAGTGTGCCCTCATCT-CAAAGTCGGCTGGAGGAATCGGTGTGGCTGTCAGCT 32217
Query 7823 ACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGC 7882
| | | | | || ||| ||| | ||| ||||| || | | ||| |||| |
Sbjct 32218 GCATCAGATCAACAGGGAGCTACATTGCCGGCACAAACGGCAACTCAAACGGGTTAGTCC 32277
Query 7883 CCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGGAAAGCGCAAA- 7941
||||| || | || | ||| ||| ||| ||| |||| |||||||| || || ||||
Sbjct 32278 CCATGCTGAGAGTTTACAACAACACGGCGCGTTATGTCGACCAGGGCGGCAA---CAAAA 32334
Query 7942 -----GGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAA 7996
|| ||| ||||| || |||||||||||||| || | | | | ||
Sbjct 32335 GACCCGGAGCCTTCGCCATGTACCTGGAGCCGTGGCACTTCGATGTGTTTGACTTCCTGG 32394
Query 7997 ATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGC--GCGATCTATTCTTCGGATT 8054
| ||| |||| || || | |||| || || | || || |||| || |
Sbjct 32395 AGCTGAAGAAGAACACAGGAAAGGAGG--AGCAGAGGGCCAGAGACCTTTTCTACGCCCT 32452
Query 8055 GTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTG 8114
|||| | || || |||| |||| | | || | | || | | ||||| || |||||
Sbjct 32453 GTGGATCCCTGACTTGTTCATGAAGAGAGTGGAAAGCAACCAAGACTGGTCTCTGATGTG 32512
Query 8115 CCCCGATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAA 8174
||| || || || | | | || ||| | ||||| | | ||||
Sbjct 32513 TCCCAATGAGTGTCCCGGGCTGGACGAGTGTTGGGGTGAGGAGTTTGAGAAGCTCTACAC 32572
Query 8175 ACAATACGAACACGACGGCGCGTACGTGCGGCAAGTGAAAGCGCGCGACCTGCACCGCGC 8234
||| || | || || | | ||| ||||| || | | || | |||
Sbjct 32573 TTCATATGAGAAGGAGGGGAGGGTCAAGCGTGTGGTGAAGGCTCAGCAGGTGTGGCACGC 32632
Query 8235 CATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAA 8294
||| || || | || | |||||||||| |||||||||||||||||||||||| |||||
Sbjct 32633 CATCATTGAGTCCCAGACAGAAACCGGTACGCCGTACATGCTGTACAAAGACGCCTGCAA 32692
Query 8295 CGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAAT 8354
| || ||||| || || ||||||| || ||||||| || ||| | |||||
Sbjct 32693 CCGAAAGAGCAACCAGCAGAATCTGGGCACAATCAAAAGCAGCAACCTCTGCACAGAAAT 32752
Query 8355 TGTACAGTACAGC-GCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTTAA 8413
|| | |||| | ||| ||| || || || || || ||||| || || | | |
Sbjct 32753 CGTTGAATACACCAGCG-ACGATGAGGTAGCGGTCTGTAATCTGGCCTCCATTGCGCTCA 32811
Query 8414 ACGCGTTCGTTGATCGACGCTCA-AACACTTACGACTTTGAACAATTGAAAAACGCCGTG 8472
|| || || || | || | |||| |||||| || || | | | | |
Sbjct 32812 ACATGTACG----TCACCCCTGAGCGGACTTTTGACTTTAAAAAACT-AGCATCTGTGAC 32866
Query 8473 C-AAGTGACGGTACGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGGAAGA 8531
| |||| | || | || || | ||||| || | || || ||||| || ||
Sbjct 32867 CAAAGTCATTGTCAGAAACTTGAACAAGATCATCGAGATTAACTTCTATCCAGTGCCCGA 32926
Query 8532 AGCGCGCGTA-TCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCG 8590
|||| | | | || |||| ||| ||||| || | || | ||||| |||||| |||| |
Sbjct 32927 AGCG-GAGAAGTCCAACAAGCGTCACAGGCCAATAGGAATCGGCGTTCAAGGTTTGGCGG 32985
Query 8591 ACGCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAA 8650
| || || | || |||| ||| | ||||||| || |||| |||| |||||
Sbjct 32986 ATGCCTTCATCCTGATGCGTTACCCGTTTGAAAGCCCCGAGGCGCAGCTGCTGAACATCC 33045
Query 8651 AAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGAGAAT 8710
|||| || || | || |||| ||| | || || ||||| | || ||| ||
Sbjct 33046 AAATCTTTGAGACCATCTACTACGCCGCCCTGGAGGCGAGCTGCGAGCTGGCCGCTGAGC 33105
Query 8711 TGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACA 8770
| ||| | ||||| |||||| ||| || | |||| || || | || |||||||
Sbjct 33106 TCGGCCCCTACGAGACGTACGAAGGCTCTCCGGTCAGCAAGGGGATCCTCCAGTACGACA 33165
Query 8771 TGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTC 8830
||||| | ||||||||| | ||| | | |||| |||| || || ||
Sbjct 33166 TGTGGGAGAAGACGCCCACCGATCTGTTGGACTGGAAGCTGCTGAAGGAAAAGATCGCCA 33225
Query 8831 AATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAA 8890
|| ||| || | || || || |||| |||||||| ||| | || || || |
Sbjct 33226 AACACGGCGTGAGGAACAGCCTACTGCTGGCCCCGATGCCCACGGCCTCCACAGCACAGA 33285
Query 8891 TAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTAC 8937
| |||| |||||||| || | || | | ||||| |||| | |||
Sbjct 33286 TCCTGGGCAACAACGAGTCTATCGAAGCCTACACCAGCAACATCTAC 33332
>seq331
Length=323222
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || || || |||| || ||||| || ||||| ||||| || ||||||||||||
Sbjct 7702 CCGCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 7761
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| ||||| ||||| |||| | |||||| ||||| ||
Sbjct 7762 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 7821
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || || || || || ||||| || | ||||| | || ||
Sbjct 7822 ATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACC 7881
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|| || || ||||| || ||||| | || || || || || ||||| ||
Sbjct 7882 TCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATGTT 7931
>seq30
Length=3550406
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 8232 CGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTG 8291
|||||| ||||| | ||| | ||||| || | ||||||||||| ||||| || || ||
Sbjct 773219 CGCCATCATCGAGTCTCAGACGGAAACGGGAACCCCGTACATGCTTTACAAGGATGCCTG 773278
Query 8292 CAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGA 8351
||| | || ||||| || ||| |||||||||| | |||||| |||||| | ||
Sbjct 773279 CAATGGGAAGAGCAACCAGCAGAACCTGGGCACCATCAAATCCAGCAACCTGTGCACAGA 773338
Query 8352 AATTGTACAGTACA 8365
|| ||| ||||||
Sbjct 773339 GATCGTAGAGTACA 773352
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505358637780880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |