Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq67 477 1e-129 seq508 105 9e-18 seq30 89.7 7e-13 >seq67 Length=1635559 Score = 477 bits (528), Expect = 1e-129 Identities = 1288/1955 (66%), Gaps = 29/1955 (1%) Strand=Plus/Minus Query 68653 TTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTA 68712 ||||| ||||| || ||||||| |||||||| | || | || ||||| ||||| Sbjct 33427 TTCTTCATCTCCTCGTTCCACAGCCCCCTCTCCGTCAGGTCTTTGAGCAGATGAGGATTC 33368 Query 68713 ACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 68772 || || ||||| || ||||| | || || || ||||| || || ||||| || | ||| Sbjct 33367 ACGATCTGAAACTCTCCAGAGAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCG 33308 Query 68773 ACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAAT 68832 | ||| || || || ||||| || || || || || || || ||||| || |||| || | Sbjct 33307 ATAGACTCGTTGTTGCCCAGGATCTGTGCTGTGGAGGCCGTGGGCATCGGGGCCAGCAGT 33248 Query 68833 AAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGA 68892 | || || || | || ||| | ||| || || || || | ||||| ||| | ||| Sbjct 33247 AGGCTGTTCCTCACGCCGTGTTTGGCGATCTTTTCCTTCAGCAGCTTCCAGTCCAACAGA 33188 Query 68893 TCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCA 68952 || | || | ||| | ||||| || || || || || || | || || Sbjct 33187 TCGGTGGGCGTCTTCTCCCACATGTCGTACTGGAGGATCCCCTTGCTGACCGGAGAGCCT 33128 Query 68953 TTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCG 69012 | || || || || || || || | || || || || || ||||| | || || Sbjct 33127 TCGTACGTCTCGTAGGGGCCGAGCTCAGCGGCCAGCTCGCAGCTCGCCTCCAGGGCGGCG 33068 Query 69013 TAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGA 69072 || || || || || || || | | || || || || || | || || || || Sbjct 33067 TAGTAGATGGTCTCAAAGATTTGGATGTTCAGCAGCTGCGCCTCGGGGCTTTCAAACGGG 33008 Query 69073 TAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGT 69132 ||| | | || || || ||||| ||||| || ||||| || || || || || || || Sbjct 33007 TAACGCATCAGGATGAAGGCATCCGCCAAACCTTGAACGCCGATTCCTATTGGCCTGTGA 32948 Query 69133 CTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTA 69192 | ||| || || | || ||||| || | ||||| | ||||| || || || || || Sbjct 32947 CGCTTGTTGGACTTCTCCGCTTCGGGCACTGGATAGAAGTTAATCTCGATGATCTTGTTC 32888 Query 69193 AGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAAT---CGTCCA 69249 | |||| ||| | ||||| ||| |||||| ||| ||||| || || Sbjct 32887 AAGTTTCTGACAATGACTTTGGTCACAGATGCTAGTTTTTTAAAGTCAAAAGTCCGCTCA 32828 Query 69250 TCTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAA 69309 | || |||| || || || | || || |||||||| || |||||||||| Sbjct 32827 GGGGTGACGTACATGTTGAGCGCAATGGAGGCCAGATTACAGACCGCTACCTCATCGTCG 32768 Query 69310 TTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGC 69369 | | |||| | || ||||| || || || || | |||||| || |||||||| ||| Sbjct 32767 CTGGTGTATTCAACGATTTCTGTGCAGAGGTTGCTGCTTTTGATTGTGCCCAGATTCTGC 32708 Query 69370 TGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATC 69429 || || |||||| ||| |||||||| ||||| || || |||| ||||| ||||| || Sbjct 32707 TGGTTGCTCTTTCGGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCGGTTTCTGTC 32648 Query 69430 TGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTTC 69489 || || || || || | | ||| || | ||| || | || |||| | | | Sbjct 32647 TGGGACTCAATGATGGCGTGCCACACCTGCTGAGCCTTCACCACACGCTTGACCCTCCCC 32588 Query 69490 TCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCA 69549 || || |||||| || || ||| || || || || |||||| || |||| || Sbjct 32587 TCCTTCTCATATGAAGTGTAGAGCTTCTCAAACTCCTCACCCCAACACTCGTCCAGCCCG 32528 Query 69550 GGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTA--ACTCGTTTCATAA 69607 ||||| ||||| |||||||||| ||||| | | | | ||| |||| ||||| | Sbjct 32527 GGACACTCATTGGGACACATCAGAGACCAGTCTTGGT--TGCTTTCCACTCTCTTCATGA 32470 Query 69608 ATAGATCGGGAATCCAAAGAGC-TATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCT 69666 | | || || ||||| || || || ||| || ||||||| || | || || |||||| Sbjct 32469 ACAAGTCAGGGATCCACAGGGCGTAGAAA-AGGTCTCTGGCCCTCTGCTCCTCCTTTCCT 32411 Query 69667 GTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 69726 || || || || || || || || || | | ||| | ||||| || || || || || Sbjct 32410 GTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCGAAGTGCCACGGCTCCAGGTACATG 32351 Query 69727 GCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAG 69786 || | | |||| |||| ||| || || ||||| || | || | || ||||| || || Sbjct 32350 GCGAAGGCTCCGGGTCTTTTGTTGCCGCCCTGGTCGACATAACGCGCCGTGTTGTTGTAA 32291 Query 69787 ACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCT 69846 ||||||||||| || | | || || || || || ||||| || | ||| || || ||| Sbjct 32290 ACTCTCAGCATGGGGACTAACCCGTTTGAGTTGCCGTTTGTGCCGGCAATGTAGCTCCCT 32231 Query 69847 CTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 69906 ||| | || || | || | ||| |||||||| ||| || ||||| || ||| Sbjct 32230 GTTGATCTGATGCAGCTGACAGCCACACCGATTCCTCCAGCCGACTTTGAGATGAGGGCA 32171 Query 69907 CAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAA 69966 || | |||| ||||| || || || || ||||| || || ||||| || || || Sbjct 32170 CACTGCTTCAGAGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGCGAGCAGGAAG 32111 Query 69967 CAGCTAGACATTTGATG-ATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGT 70025 ||||| |||| ||| | ||| | || || ||||| || | ||||| || ||||| || Sbjct 32110 CAGCTGGACAGCTGAGGCCTGT-TGGTACCGGCATTGAAGAGAGTAGGCGAGGCGTGGGT 32052 Query 70026 GAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCC-CACTGAT 70084 |||||| || || || ||||| ||||| || ||||| |||| || || ||| ||| | Sbjct 32051 GAACCACTTCTCCGACAGCAGGTTGTAGGTCTCAATGGCTGCGTCGATGTCCGTTCTG-T 31993 Query 70085 GAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTA 70144 | || || | | || | ||| | ||| ||||| |||||||| || ||| || | Sbjct 31992 GGATGCCAACAGAAACCCTCATGAGCATGTGCTGGGGTCGTTCGGCCACTTTGCCGTTGA 31933 Query 70145 TTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTC 70204 | |||| |||||| || |||||||| || || ||||| ||||||| || ||||| | Sbjct 31932 TCTTCAGCAGGTAGGACCGCTCCAGAGTCTTGAAGCCAAAGAAGTTGTAGGAGAAGTCAC 31873 Query 70205 TTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATT--TGGTAACTATATC---CAT 70259 ||| |||| || | || || || || || | | ||| || || || | | Sbjct 31872 GGTCGAAAATGATGGCGGAGTTGAGGCGGTCTTTGTTCTCCTGG--ACAATGTCGAGCGT 31815 Query 70260 AACAGTAGGTGAGATAATCGGAGA---TCGTTTACCATTTTTAGGATTAACATAGTTGAA 70316 | | ||||| || ||||| ||||| || || || ||||||||| | Sbjct 31814 CTCCTT---GGAGATCATGGGAGAGTGGCGTTT---GTTCAAGGGGTTGACATAGTTGTA 31761 Query 70317 TAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGC 70376 | || ||||| || || || || | || || || || ||||| | ||||| | ||| Sbjct 31760 CAGGTCCTCCATCACGTCGCTGAACACCTTCTTGGTCTCTTTGTGCAGGTTTGAGACGGC 31701 Query 70377 TATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTC 70436 || | || || || || |||||||| || |||| || || ||| || || || || Sbjct 31700 GATCCGAGCAGCGAGGATTGCATAGTCGGGGTGTTTGGTTGTGAGAGTGGCGGCGATCTC 31641 Query 70437 CGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTT 70496 || || | ||| || | || | || || || ||| | || | || ||||| || || Sbjct 31640 AGCCGCCAGCGTGTCGAGCTCCACGGTGGTGACGCCGCTGTACAAACCCTGAATCACCTT 31581 Query 70497 CATGGCTATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAACATAATTTTCTAAT 70556 ||| | || | | ||||| | || || | |||||| || || || | || || Sbjct 31580 CATCGTAATCTGGGCTGGATCCACAAAGTCAGAGTTCAGCCCGTAGCACAGCTTCTGGAT 31521 Query 70557 ACGAGATGTAATTTTATCAAACATAACATTCTCCT 70591 || || || |||||||| ||||| || ||||| Sbjct 31520 GCGGGAGGTGATTTTATCGAACATGACGCGCTCCT 31486 >seq508 Length=211378 Score = 105 bits (116), Expect = 9e-18 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 ||||||| || ||||| | || || || || || || ||||||||||| || | ||| | Sbjct 169635 CCTCATCCCTGCTAATCAGCTCATTGGAGAAGGTAAGACCAGGCATTAGCCCTCTCTTCT 169576 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 |||||||| | |||||||| || || || || |||||||| || || |||||||| || | Sbjct 169575 TGAGCCAATAGATGGCAGCGAATGAGCCTGAGAAGAAGATACCCTCCACTGCTGCGAAAG 169516 Query 39759 CAACAAGTCTCTCTCC 39774 | || | |||||| || Sbjct 169515 CCACGATTCTCTCCCC 169500 >seq30 Length=3550406 Score = 89.7 bits (98), Expect = 7e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 69325 ATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTG 69384 |||||||| || || || || ||||||| || ||||| || ||||| || ||||| Sbjct 773341 ATCTCTGTGCACAGGTTGCTGGATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCCA 773282 Query 69385 TTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAAT 69443 || ||||| ||||||||||| || |||| || || ||||| ||||||| ||||| || Sbjct 773281 TTGCAGGCATCCTTGTAAAGCATGTACGGGGTTCCCGTTTCCGTCTGAGACTCGATGAT 773223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686854757450160