Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq2174 104 2e-17
seq328 87.8 1e-12
>seq2174
Length=19132
Score = 104 bits (114), Expect = 2e-17
Identities = 78/92 (85%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 77433 CACCATTGATGGTGAACATGCTGTCTGTGTAGACGACCAGCTTCTTGATTTTGTTCTCCT 77492
|||| |||||||||||| ||||||| ||||||| |||||||||||| || || ||||| |
Sbjct 8628 CACCGTTGATGGTGAACTTGCTGTCCGTGTAGAGGACCAGCTTCTTTATGTTATTCTCTT 8569
Query 77493 GAGCTTGTTGCAGTGCTTTGGATGCAGCCTGG 77524
||||||| ||| |||||| | |||||||||
Sbjct 8568 TGGCTTGTTCCAGCGCTTTGCAGGCAGCCTGG 8537
Score = 96.9 bits (106), Expect = 3e-15
Identities = 101/130 (78%), Gaps = 2/130 (2%)
Strand=Plus/Minus
Query 77308 CAGCCAGACAACCTCCAGCTCCAAATTGAGTTGGTCCAGCTTCATAAAGTCATCCTTGTT 77367
|| |||||| ||||||| ||| || || ||||||||||| |||||| || |||||
Sbjct 8862 CACCCAGACCACCTCCACCTCTGCGTTCAGCCCGTCCAGCTTCACAAAGTCTTCTTTGTT 8803
Query 77368 GACAA-CTGACCCTCCGCCATGCAGCCTCCAGCCGTTCTGCTTCCAGTTCTTAACCCACT 77426
|| | |||||| ||| | |||||||||||||||| |||||||| |||| |||||
Sbjct 8802 GATGATCTGACC-TCCAGATTTCAGCCTCCAGCCGTTCAGCTTCCAGGTCTTCACCCAGC 8744
Query 77427 TAGTCACACC 77436
| ||||||||
Sbjct 8743 TGGTCACACC 8734
>seq328
Length=324763
Score = 87.8 bits (96), Expect = 1e-12
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 87328 CCTGCTCCCAGTTTACTAAAATCTTTCTTAGATTGAAATGTATAGACTGTCAAGCCAGCA 87387
|||||||||| ||| || || ||| |||| || || || || ||| |||||| ||||||
Sbjct 172450 CCTGCTCCCATTTTGCTGAAGTCTCTCTTGGACTGGAAGGTGTAGGCTGTCAGTCCAGCA 172509
Query 87388 AACACAGCACATGTTaaaaaaaGCGATTGTAGTATGGTGGAGTATTCATAGAAGGTCA 87445
|| || ||||| || | || | | ||| || | |||||||||||||||||||||
Sbjct 172510 AATACTGCACAGGTCAGGAACAAGGCTTGCAGCACAATGGAGTATTCATAGAAGGTCA 172567
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397425511895470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |