Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq67 219 5e-52 seq30 95.1 1e-14 >seq67 Length=1635559 Score = 219 bits (242), Expect = 5e-52 Identities = 939/1459 (64%), Gaps = 40/1459 (3%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| ||| | ||||| | || | |||| ||||| |||| ||| || ||||||||| Sbjct 33331 TAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGTGCTGTGGAG 33272 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || |||||||| || |||| || |||||||| | | || | || || |||| Sbjct 33271 GCCGTGGGCATCGGGGCCAGCAGTAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTTTCC 33212 Query 118302 TTGAG-AGCGTCCCAGTCGTAGTTGAGCTTTGT-CTCCCCCTGCCACATATCAAACTGGA 118359 || || ||| ||| |||| | || | || | | || |||||| || |||||| Sbjct 33211 TTCAGCAGCTTCC-AGTCCAACA-GATCGGTGGGCGTCTTCTCCCACATGTCGTACTGGA 33154 Query 118360 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCC---CTCAACCTCCG 118416 |||| || | | | || || || || | ||||| || ||||| |||| | | Sbjct 33153 GGATCCCCTTGCTGACCGGAGAGCCTTCGTACGTCTCGTAGGGGCCGAGCTCAGCG---G 33097 Query 118417 CCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCA 118476 ||| ||| |||||||||| ||||| |||| || || || ||||| || | |||| Sbjct 33096 CCAGCTCGCAGCTCGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATTTGGATGTTCA 33037 Query 118477 TTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGAC 118536 || |||||| | ||||||| | || || || || ||||||| | || Sbjct 33036 GCAGCTGCGCCTCGGGGCTTTCAAACGGGTAACGCATCAGGATGAAGGCATCCGCCAAAC 32977 Query 118537 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGG 118596 |||| || |||| || ||||| | || | | | || |||||| || ||| | Sbjct 32976 CTTGAACGCCGATTCCTATTGGCCTGTGACGCTTGTTGGACTTCTCCGCTTCGGGCACTG 32917 Query 118597 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT 118656 |||| || || | ||||| | | | || | ||| || | || || || | || Sbjct 32916 GATAGAAGTTAATCTCGATGATCTTGTTCAAGTTTCTGACAATGACTTTGGTCA---CA- 32861 Query 118657 GAAGCT--TTTCGTAA--TCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCG 118712 || ||| ||| ||| |||||| | || ||| |||| ||| | || || Sbjct 32860 GATGCTAGTTTTTTAAAGTCAAAAGTCCG---CTCAGGGGTGACGTACATGTTGAGCGCA 32804 Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772 || || ||||||||||| || | |||||| | ||||| || | ||||| ||| Sbjct 32803 ATGGAGGCCAGATTACAGACCGCTACCTCATCGTCGCTGGTGTATTCAACGATTTCTGTG 32744 Query 118773 CACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 118832 || | ||| || || || ||||||| |||| || || |||| ||| || || Sbjct 32743 CAGAGGTTGCTGCTTTTGATTGTGCCCAGATTCTGCTGGTTGCTCTTTCGGTTGCAGGCG 32684 Query 118833 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 118892 || ||||| |||||||| ||||| || || || || ||||||| | || || | ||| Sbjct 32683 TCTTTGTACAGCATGTACGGCGTACCGGTTTCTGTCTGGGACTCAATGATGGCGTGCCAC 32624 Query 118893 ACATCGGCAGCTGGCAC-AGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAG 118951 || | ||| ||| | || ||| | | |||||| | ||| || |||||||| Sbjct 32623 ACCTGCTGAGCCTTCACCACACGC-TTGACCCTCCCCTCCTTCTCATATGAAGTGTAGAG 32565 Query 118952 GGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAG 119011 |||||||| |||||| ||| ||||| || || || || || | || Sbjct 32564 CTTCTCAAACTCCTCACCCCAACACTCGTCCAGCCCGGGACACTCATTGGGACACATCAG 32505 Query 119012 AGACCA---TTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068 |||||| ||| | ||| || | ||||||||| | ||| |||||||| || || Sbjct 32504 AGACCAGTCTTGGTTGCTTTCC---ACTCTCTTCATGAACAAGTCAGGGATCCACAGGGC 32448 Query 119069 CGAGAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 119127 |||| || || | | | ||| || | | || || || || ||||| | Sbjct 32447 GTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCCAGGA 32389 Query 119128 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTACGA 119183 |||| | | ||| ||||||||| |||||||||| |||| | || ||| | Sbjct 32388 AGTCAAACACATCGAAGTGCCACGGCTCCAGGTACATGGCGAAGGCTCCGGGTCTTTTGT 32329 Query 119184 CGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATA 119243 | || |||||| ||||| | ||| ||| ||| | || | ||||| || | | Sbjct 32328 TG-CCGCCCTGGTCGACATAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACTAAC 32270 Query 119244 CCATCGGATTGGCCATTTGTCCCCCGAATAC-GAGACTTATTGGCTCTGACATCGTGGAT 119302 || | || | ||| ||||| || ||| | | | ||| ||||| | || Sbjct 32269 CCGTTTGAGTTGCCGTTTGTGCCGGCAATGTAGCTCCCTGTTGA-TCTGATGCAGCTGAC 32211 Query 119303 GTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTA 119362 || ||| || || || ||| |||||||||| | || |||| | | ||| || |||| Sbjct 32210 AGCCACACCGATTCCTCCAGCCGACTTTGAGATGAGGGCACACTGCTTCAGAGTGTCGTA 32151 Query 119363 GATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCT 119422 ||| || ||||| ||| |||| | |||| ||||||||||| |||| |||||||| Sbjct 32150 GATGCCTTCGATGCTGTCGTCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGAGGCCT 32091 Query 119423 GGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCT 119481 | ||||| || ||||||||||| || | |||||| ||||| || | | |||| | Sbjct 32090 GTTGGTACCGGCATTGAAGAGAGTAGGCGAGGCGTGGGTGAAC-CACTTCTCCGACAGCA 32032 Query 119482 TGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCA 119541 || ||||||||| | | | ||| ||||| | ||| || || | || |||| || Sbjct 32031 GGTTGTAGGTCTCAATGGCTGCGTCGATGTCCGTTCTGTGGATGCCAACAGAAACCCTCA 31972 Query 119542 TAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCT 119601 | | ||||| |||||| ||| || | || | || | || | ||||| | || Sbjct 31971 TGAGCATGTGCTGGGGTCGTTCGGCCACTTTGCCGTTGATCTTCAGCAGGTAGGACCGCT 31912 Query 119602 CCAAGGTCTTGAGACCAAA 119620 ||| ||||||| ||||| Sbjct 31911 CCAGAGTCTTGAAGCCAAA 31893 >seq30 Length=3550406 Score = 95.1 bits (104), Expect = 1e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| ||| | ||||| | ||||| | |||| ||||| |||| ||| ||||| ||||| Sbjct 774268 TAGATGTTGCTGGTGTAGGCCTCAATGGACTCGTTGTTGCCCAGGATCTGGGCAGTGGAA 774209 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 118273 |||||||||||||| |||| ||| |||||||| Sbjct 774208 GCTGTGGGCATGGGGGCCAAGAGCAGGCTGTT 774177 Score = 84.2 bits (92), Expect = 3e-11 Identities = 105/142 (74%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 118752 GTGTACTCTATAATTTCCGTGCACAAGTT--TGAACTCTTAATGGTGCCCAAGTTCTTTT 118809 |||||||||| || || ||||||| ||| || | | | |||||||||| ||||| | Sbjct 773353 GTGTACTCTACGATCTCTGTGCACAGGTTGCTGGATT--TGATGGTGCCCAGGTTCTGCT 773296 Query 118810 GATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTT 118869 | || ||| || || |||||||||||||||||||| || || ||||| ||||| | Sbjct 773295 GGTTGCTCTTCCCATTGCAGGCATCCTTGTAAAGCATGTACGGGGTTCCCGTTTCCGTCT 773236 Query 118870 GGGACTTGAGAATAGCCTTCCA 118891 | |||| || || || | ||| Sbjct 773235 GAGACTCGATGATGGCGTACCA 773214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618386544610640