Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq67 223 4e-53
seq508 91.5 2e-13
>seq67
Length=1635559
Score = 223 bits (246), Expect = 4e-53
Identities = 902/1397 (65%), Gaps = 38/1397 (3%)
Strand=Plus/Plus
Query 104314 GTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAG 104373
||||| ||||| | || || ||||||||||| ||||| || || || |||||||
Sbjct 32048 GTTCACCCACGCCTCGCCTACTCTCTTCAATGCCGGTACCAACAGGCCTCAGCTGTCCAG 32107
Query 104374 TTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGA 104433
|||||||| |||||| ||||| ||| ||| | || ||||| | ||||| | | |
Sbjct 32108 CTGCTTCCTGCTCGCCATGAAGGACGACAGCATCGAAGGCATCTACGACACTCTGAAGCA 32167
Query 104434 GTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATG--TGAGA 104491
|||||| | |||||||||| |||||| || || || || || | || | |||
Sbjct 32168 GTGTGCCCTCATCTCAAAGTCGGCTGGAGGAATCGGTGTGGCTGTCA--GCTGCATCAGA 32225
Query 104492 GCCA-ATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCT 104550
| | | | || ||| || ||||| || | ||| | || | | || |||||
Sbjct 32226 TCAACAGGGAGCTAC-ATTGCCGGCACAAACGGCAACTCAAACGGGTTAGTCCCCATGCT 32284
Query 104551 TCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGAT 104606
| || | ||| ||| ||||| ||||| | || | || | | |||| |||
Sbjct 32285 GAGAGTTTACAACAACACGGCGCGTTATGTCGACCAGGGCGG-CAACAAAAGACCCGGAG 32343
Query 104607 CTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTC 104666
| |||| | || || ||||| |||||| ||| | | || ||||| ||| ||
Sbjct 32344 CCTTCGCCATGTACCTGGAGCCGTGGCACTTCGATGTGTTTGACTTCCTGGAGCTGAAGA 32403
Query 104667 TCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAG 104726
||| ||| | |||||| | || | | || || |||| ||| || ||||| || |
Sbjct 32404 AGAACACAGGAAAGGAGGAGCAGAGGGCCAGAGACCTTTTCTACGCCCTGTGGATCCCTG 32463
Query 104727 ATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAAT---TGGTCTCTCTTTTGTCCAGACA 104783
| | |||||||||||||| ||| || | | |||||||| | ||||| |
Sbjct 32464 ACTTGTTCATGAAGAGAGT---GGAAAGCAACCAAGACTGGTCTCTGATGTGTCCCAATG 32520
Query 104784 AGGCACCTGGTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTAC 104842
|| || || || ||| || | ||||||||||||||| || ||||| ||
Sbjct 32521 AGTGTCCCGGGCTGGACGAGTGTTG-GGGTGAGGAGTTTGAGAAGCTCTACACTTCATAT 32579
Query 104843 GAGGAAGAAGGTCGGGCGACTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCT 104901
||| | || || ||| | ||| |||| ||| | |||||| | || || |
Sbjct 32580 GAGAAGGAGGGGAGGGTCAA-GCGTGTGGTGAAGGCTCAGCAGGTGTGGCACGCCATCAT 32638
Query 104902 CAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAA 104961
|||| || || || || ||||| || |||||||| |||||||||||||| |||| |||
Sbjct 32639 TGAGTCCCAGACAGAAACCGGTACGCCGTACATGCTGTACAAAGACGCCTGCAACCGAAA 32698
Query 104962 GAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGA 105021
||| || || ||||| |||| ||||| || ||| ||||| ||||||||| | ||
Sbjct 32699 GAGCAACCAGCAGAATCTGGGCACAATCAAAAGCAGCAACCTCTGCACAGAAATCGTTGA 32758
Query 105022 ATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTA 105081
|| || | | |||||| || || ||||| || || || || || ||| || |||
Sbjct 32759 ATACACCAGCGACGATGAGGTAGCGGTCTGTAATCTGGCCTCCATTGCGCTCAACATGTA 32818
Query 105082 TGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGT 105141
|| || ||| ||| ||||| | | ||||||| || || ||| ||
Sbjct 32819 CGTCACCCCTGAG---CGGACTTTTGACTTTAAAAAACTAGCATCTGTGACCAAA---GT 32872
Query 105142 CA---CCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCG 105198
|| || |||| | |||| | || || | || || || || || ||
Sbjct 32873 CATTGTCAGAAACTTGAACAAGATCATCGAGATTAACTTCTATCCAGTGCCCGAAGCGGA 32932
Query 105199 TAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATT 105258
|| || || | | | ||| | ||||| || |||| ||||| ||| | ||||||| ||
Sbjct 32933 GAAGTCCAACAAGCGTCACAGGCCAATAGGAATCGGCGTTCAAGGTTTGGCGGATGCCTT 32992
Query 105259 CATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATT 105318
||| || || || | ||||| | ||| ||| || | || | || ||
Sbjct 32993 CATCCTGATGCGTTACCCGTTTGAAAGCCCCGAGGCGCAGCTGCTGAACATCCAAATCTT 33052
Query 105319 TGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCC 105378
||||||||| || ||||||| || |||||||| | ||| |||| | | || ||
Sbjct 33053 TGAGACCATCTACTACGCCGCCCTGGAGGCGAGCTGCGAGCTGGCCGCTGAGCTCGGCCC 33112
Query 105379 ATATGAAACCTTTGAGGGTTCTCCAGCTTCA-CAAGGGG-TGCTTCAATTTGATATGTGG 105436
|| || || | || || ||||| | ||| ||||||| | || || | || ||||||
Sbjct 33113 CTACGAGACGTACGAAGGCTCTCCGG--TCAGCAAGGGGATCCTCCAGTACGACATGTGG 33170
Query 105437 GAAGGTGA-GACCAAGCTTCACTACGACTGGGAAGCT-CTCAAGGAACGCATCAAGGAGA 105494
| || || | ||| || | |||| ||||||| || |||||| ||| |
Sbjct 33171 G-AGAAGACGCCCACCGATCTGTTGGACT-GGAAGCTGCTGAAGGAAAAGATCGCCAAAC 33228
Query 105495 AGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCT 105554
| || | | ||||| || || |||| || ||||| || |||||||| ||||| |||
Sbjct 33229 ACGGCGTGAGGAACAGCCTACTGCTGGCCCCGATGCCCACGGCCTCCACAGCACAGATCC 33288
Query 105555 TGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCG 105614
|||| || || || | | ||| ||||||| | |||||||| | || ||||
Sbjct 33289 TGGGCAACAACGAGTCTATCGAAGCCTACACCAGCAACATCTACACCCGCAGGGTCCTCT 33348
Query 105615 CGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCT 105674
| ||||||||| ||| || || ||||| | | ||||| | |||| || || |
Sbjct 33349 CTGGAGAGTTTCAGATCGTGAATCCTCATCTGCTCAAAGACCTGACGGAGAGGGGGCTGT 33408
Query 105675 GGTCCAAGGATATGAAG 105691
|| | |||| ||||||
Sbjct 33409 GGAACGAGGAGATGAAG 33425
>seq508
Length=211378
Score = 91.5 bits (100), Expect = 2e-13
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 94887
|| ||||||||||||||||| || || ||| || || ||||||||||||||| ||||
Sbjct 169527 GTGGAGGGTATCTTCTTCTCAGGCTCATTCGCTGCCATCTATTGGCTCAAGAAGAGAGGG 169586
Query 94888 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 94922
|| ||||| ||||| ||||||||| ||||| ||
Sbjct 169587 CTAATGCCTGGTCTTACCTTCTCCAATGAGCTGAT 169621
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583214911956560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |