Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq67 280 2e-70
seq134 89.7 6e-13
seq508 87.8 2e-12
seq30 87.8 2e-12
>seq67
Length=1635559
Score = 280 bits (310), Expect = 2e-70
Identities = 950/1460 (65%), Gaps = 55/1460 (4%)
Strand=Plus/Minus
Query 78508 AACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCG 78567
||||| || | ||| || ||| |||||||||| | ||||| | |||| || ||||
Sbjct 33358 AACTCTCCAGAGAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCGATAGACTCG 33299
Query 78568 TTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATTC 78627
||||| |||| |||||| || || ||||| || ||||| || || | |||||| |||
Sbjct 33298 TTGTTGCCCAGGATCTGTGCTGTGGAGGCCGTGGGCATCGGGGCCAGCAGTAGGCTGTTC 33239
Query 78628 CGAAGACCATGCGTCTTGATCTCGACCTTTAGG------CCGTCCCAAAATTCATTCGCC 78681
| | || || | ||||| |||| || | |||| | | || | | |
Sbjct 33238 CTCACGCCGTGTTTGGCGATCTTTTCCTTCAGCAGCTTCCAGTCCAACAGATCGGTGGGC 33179
Query 78682 GCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAACGTC 78741
| || |||||||||| || ||||| |||| | |||| || || | | |||||
Sbjct 33178 GTCTTCTCCCACATGTCGTACTGGAGGATCCCCTTGCTGACCGGAGAGCCTTCGTACGTC 33119
Query 78742 TCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGCAGGGCCGCGTGGTACACA 78801
||||| | || ||| ||| || ||||| | | |||||| |||| ||| |
Sbjct 33118 TCGTAGGGGCCGAGCTCAGCGGCCAGCTCGCAGCTCGCCTCCAGGGCGGCGTAGTAGATG 33059
Query 78802 GCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTCGTCGAACGA--AAGGCCGA 78859
| ||| ||||| |||| ||| |||||| || || |||| || || |
Sbjct 33058 GTCTCAAAGATTTGGATGTTCAGCAGCTGCGCCTCGGGGCTTTCAAACGGGTAACGC--A 33001
Query 78860 GCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGT 78919
|| |||||| |||| |||| || || |||||||| | || || | ||| ||| |||
Sbjct 33000 TCAGGATGAAGGCATCCGCCAAACCTTGAACGCCGATTCCTATTGGCCTGTGACGCTTGT 32941
Query 78920 TGCTCTTTCGGGCCGCCTCGGTC---GGGTAAAAGTTCCGATCGATGACGCGGTTCAGGT 78976
|| ||| |||| |||| | || || ||||| ||||||| ||||| ||
Sbjct 32940 TGGACTTCT---CCGCTTCGGGCACTGGATAGAAGTTAATCTCGATGATCTTGTTCAAGT 32884
Query 78977 TACGCGTGAC---GACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAATGATTTCCTT 79033
| | |||| ||| ||||| | ||| || |||||| |||
Sbjct 32883 TTC---TGACAATGACTTTGGTCACAGATGCTAGTTTTTTAAAGTCAAAAG----TCCGC 32831
Query 79034 TGATGAAAGTCG-----GTAG-GCACAGCG-ATGCCAGGTTGCACACGGCCGTCTCGTCC 79086
| | | | || || | || || | | ||||| || || || || ||| ||
Sbjct 32830 TCAGGGGTGACGTACATGTTGAGCGCAATGGAGGCCAGATTACAGACCGCTACCTCATCG 32771
Query 79087 GGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTC 79146
||| | || | |||||||||||| | || ||||| ||||| | |||
Sbjct 32770 TCGCTGGTGTATTCAACGATTTCTGTGCAGAGGTTGCTGCTTTTGATTGTGCCCAGATTC 32711
Query 79147 TTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCA 79206
| |||||||||||| ||| |||||||| ||||| |||||||||||| ||||| ||
Sbjct 32710 TGCTGGTTGCTCTTTCGGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCGGTTTCT 32651
Query 79207 ACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGA 79266
||| || | | | ||| ||| | | | | ||| || || |||| ||
Sbjct 32650 GTCTGGGACTCAATGATGGCGTGCCACACCTGCTGAGCCTTCACCACACGCTTGACCCTC 32591
Query 79267 CCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACA-TCGGGCAG 79325
|||| | || | ||| | || | || |||| || | ||| ||| |||
Sbjct 32590 CCCTCCTTCTCATATGAAGTGTAGAGCTTCTCAAACTCCTCACCCCA-ACACTCGTCCAG 32532
Query 79326 GCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCAT 79385
|| || ||||| | || |||||||| |||||| | || | || || ||| |||
Sbjct 32531 CCCGGGACACTCATTGGGACACATCAGAGACCAGTCTTGGTTGCTTTCCACTCTCTTCAT 32472
Query 79386 GAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCC 79445
||| | ||| |||||||||||||| ||| ||||| | | | | |||||| | ||
Sbjct 32471 GAACAAGTCAGGGATCCACAGGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCC 32412
Query 79446 CTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGAT 79505
|||| |||||| || ||||| | | ||| ||||||||||||||| || ||
Sbjct 32411 TGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCGAAGTGCCACGGCTCCAGGTACAT 32352
Query 79506 GGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAA 79565
|||||| | || | ||| ||||||||||| ||| || || |||||||||||| |
Sbjct 32351 GGCGAAGGCTCCGGGTCTTTTGTTGCCGCCCTGGTCGACATAACGCGCCGTGTTGTTGTA 32292
Query 79566 AACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACC 79625
||||| |||||||| || | |||| | | |||||| || ||| || |||
Sbjct 32291 AACTCTCAGCATGGGGACTAACCCGTTTGAGTTGCCGTTTGTGCCGGCAAT----GTA-- 32238
Query 79626 GCTCGCCCGAATGTTC-GA-GCAGTGGATT------CCGATGCCCCCGGACCACTTGGAG 79677
|||| || || || || |||| || ||||| || || | | |||| |||
Sbjct 32237 GCTC--CCTGTTGATCTGATGCAGCTGACAGCCACACCGATTCCTCCAGCCGACTTTGAG 32180
Query 79678 ATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCG 79737
||| | || |||| ||| || || ||||||||||| ||||| |||||||||||| |||
Sbjct 32179 ATGAGGGCACACTGCTTCAGAGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGCG 32120
Query 79738 ACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTC 79797
| |||||||||||| |||| ||| || |||| |||||||| |||||||| || ||||
Sbjct 32119 AGCAGGAAGCAGCTGGACAGCTGAGGCCTGTTGGTACCGGCATTGAAGAGAGTAGGCGAG 32060
Query 79798 GCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGAC-GCGCGGGAGGTC 79856
||||| ||||| |||| | || ||| | ||| ||||| || | ||| || |||
Sbjct 32059 GCGTGGGTGAACCACTTCTCCGACAGCAGGTTGTAGGTCTCAATGGCTGCG-TCGATGTC 32001
Query 79857 GTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGG-CGTCTCGCCGACAT 79915
| ||||||||| || | || | ||||| | || |||||| ||| ||| | || |
Sbjct 32000 CGTTCTGTGGATGCCAACAGAAACCCTCATGAGCATGTGCTGGGGTCGT-TCGGCCACTT 31942
Query 79916 TCAGGTAGCCCTTCTGCAGG 79935
| || | |||| |||||
Sbjct 31941 TGCCGTTGATCTTCAGCAGG 31922
Score = 201 bits (222), Expect = 1e-46
Identities = 852/1333 (64%), Gaps = 47/1333 (4%)
Strand=Plus/Plus
Query 19166 GAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAAC 19225
||||| ||| ||||| || |||||| ||||| ||||| |||| || || |||||
Sbjct 32019 GAGACCTACAACCTGCTGTCGGAGAAGTGGTTCACCCACGCCTCGCCTACTCTCTTCAAT 32078
Query 19226 GCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGC 19285
|||||||| |||| || ||| |||| ||||| ||||| | || |||||||| ||||||
Sbjct 32079 GCCGGTACCAACAGGCCTCAGCTGTCCAGCTGCTTCCTGCTCGCCATGAAGGACGACAGC 32138
Query 19286 ATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGT 19345
|| || ||||||||||| || || ||| |||| || | |||||| |||| | | || ||
Sbjct 32139 ATCGAAGGCATCTACGACACTCTGAAGCAGTGTGCCCTCATCTCAAAGTCGGCTGGAGGA 32198
Query 19346 ATCGGGATCCACTGCTCGAAT--ATCCGGTCGAGTGGTACACGAATCAATGGGACGAACG 19403
||||| | ||| || | ||| | || | || | || || || ||||
Sbjct 32199 ATCGGTGT-GGCTG-TCAGCTGCATCAGATCAACAGGGAGCTACATTGCCGGCACAAACG 32256
Query 19404 GAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCA 19463
| | |||| | ||||| ||||| | || | |||||||||||| | || |||
Sbjct 32257 GCAACTCAAACGGGTTAGTCCCCATGCTGAGAGTTTACAACAACACGGCGCGTTATGTCG 32316
Query 19464 ACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGG 19523
||||||| ||| |||| | || | |||||||| ||||| ||||| |||||| |
Sbjct 32317 ACCAGGGCGGCAACAAAAGACCCGGAGCCTTCGCCATGTACCTGGAGCCGTGGCACTTCG 32376
Query 19524 ACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCG 19583
| || | || ||||| || ||| |||| || | |||||| | | | |
Sbjct 32377 ATGTGTTTGACTTCCTGGAGCTGAAGAAGAACACAGGAAAGGAGGAGCAGAGGGCCAGAG 32436
Query 19584 ACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAG 19643
|||| ||| ||| ||||||| || ||| | |||||| ||| || || | || |||
Sbjct 32437 ACCTTTTCTACGCCCTGTGGATCCCTGACTTGTTCATGAAGAGAGTGGAAAGCAACCAAG 32496
Query 19644 AATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGT 19703
| ||| |||||||| || | || || || || || ||| | || |||| ||
Sbjct 32497 ACTGGTCTCTGATGTGTCCCAATGAGTGTCCCGGGCTGGACGAGTGTTGGGGTGAGGAGT 32556
Query 19704 TCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCC 19763
| | || | ||| | || | |||| || ||||| ||||| ||| |
Sbjct 32557 TTGAGAAGCTCTACACTTCATATGAGAAGGAGGGGAGGGTCAAGCGTGTGGTGAAGGCTC 32616
Query 19764 GGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCT 19823
| | || ||| || | || | | |||| || ||||| || ||||||||| |
Sbjct 32617 AGCAGGTGTGGCACGCCATCATTGAGTCCCAGACAGAAACCGGTACGCCGTACATGCTGT 32676
Query 19824 ACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCA 19883
|||| |||||| ||| ||| || ||| |||| | ||| | ||||| ||
Sbjct 32677 ACAAAGACGCCTGCAACCGAAAGAGCAACCAGCAGAATCTGGGCACAATCAAAAGCAGCA 32736
Query 19884 ACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGG 19943
|||| || || |||||| | || ||| || ||| || || ||||||||||
Sbjct 32737 ACCTCTGCACAGAAATCGTTGAATACACCAGCGACGATGAGGTAGCGGTCTGTAATCTGG 32796
Query 19944 CGTCCCTGTGC-CTGCCGACTTTCGTCAAGGCCTCCT-------CCTTCGACTTTGCCAA 19995
| ||| | ||| || | | ||||| | ||| | || |||||| ||
Sbjct 32797 CCTCCAT-TGCGCTCAACATGTACGTCA----CCCCTGAGCGGACTTTTGACTTTAAAAA 32851
Query 19996 ATTGTACGAGGTGACCCGGGTC---GTCACGCGTAATCTGAATCGCGTCATCGATCGGAA 20052
| | |||||| ||| |||| | || |||| ||||||| ||
Sbjct 32852 ACTAGCATCTGTGACCAAAGTCATTGTCA---GAAACTTGAACAAGATCATCGAGATTAA 32908
Query 20053 CTTTTACCC---GACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGAT 20109
||| || || | |||| |||| | ||||| || | ||| ||| |||| || | ||
Sbjct 32909 CTTCTATCCAGTGCCCGAAGCGGAG---AAGTCCAACAAGCGTCACAGGCCAATAGGAAT 32965
Query 20110 CGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAA 20169
|||||| || || |||| || | ||||| || | | | | || || ||| |
Sbjct 32966 CGGCGTTCAAGGTTTGGCGGATGCCTTCATCCTGATGCGTTACCCGTTTGAAAGCCCCGA 33025
Query 20170 GGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATC 20229
||||| ||| |||| ||||| ||| || | ||| |||| || |||||| |
Sbjct 33026 GGCGCAGCTGCTGAACATCCAAATCTTTGAGACCATCTACTACGCCGC---CCTGGAGGC 33082
Query 20230 G---TGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTC 20286
| ||||| || ||| ||| |||||| |||||||||| | | || || || |
Sbjct 33083 GAGCTGCGAGCTGGCCGCTGAGCTCGGCCCCTACGAGACGTACGAAGGCTCTCCGGTCAG 33142
Query 20287 CGAGGGTATCCTCCAGCCGGACATGTGG-----GGCG-TCACTGAGAATGAGTT---TTG 20337
| |||| ||||||||| ||||||||| | || ||| | || ||| ||
Sbjct 33143 CAAGGGGATCCTCCAGTACGACATGTGGGAGAAGACGCCCACCG---ATCTGTTGGACTG 33199
Query 20338 GAGCGCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCC 20397
|| || |||| ||||| | ||||| | | ||| | || | || ||
Sbjct 33200 GAAGCTGCTGAAGGAAAAGATCGCCAAACACGGCGTGAGGAACAGCCTACTGCTGGCCCC 33259
Query 20398 CATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACAC 20457
||||| || ||||| || || |||||| |||| ||||||||| || |||| | |||||
Sbjct 33260 GATGCCCACGGCCTCCACAGCACAGATCCTGGGCAACAACGAGTCTATCGAAGCCTACAC 33319
Query 20458 GACCAACATCTAC 20470
| ||||||||||
Sbjct 33320 CAGCAACATCTAC 33332
>seq134
Length=707179
Score = 89.7 bits (98), Expect = 6e-13
Identities = 73/89 (82%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 60330 ATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACC 60389
|| ||| | ||| | ||||| ||||||| ||||||| ||| || |||| || ||||||
Sbjct 318787 ATCTACCGGGTGGAGAACCCGTTCGACTTCATGGAGAACATTTCTCTGGAGGGAAAGACC 318846
Query 60390 AACTTCTTTGAGAAGCGGGTCGGGGATTA 60418
||||||||||||||||||||||| || ||
Sbjct 318847 AACTTCTTTGAGAAGCGGGTCGGCGAGTA 318875
>seq508
Length=211378
Score = 87.8 bits (96), Expect = 2e-12
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 59991 GCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTC 60050
||||| ||| ||||| || ||||||||||| ||||| ||| ||| || | ||||||
Sbjct 169515 GCTTTCGCAGCAGTGGAGGGTATCTTCTTCTCAGGCTCATTCGCTGCCATCTATTGGCTC 169574
Query 60051 AAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAG 60110
|| ||| | || || ||||| || || | |||||||| ||||||||| | |||| |||
Sbjct 169575 AAGAAGAGAGGGCTAATGCCTGGTCTTACCTTCTCCAATGAGCTGATTAGCAGGGATGAG 169634
Query 60111 G 60111
|
Sbjct 169635 G 169635
>seq30
Length=3550406
Score = 87.8 bits (96), Expect = 2e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 79098 CTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCT 79157
||| | ||| |||||||||| || || ||||||||||| | ||||| |||||||||
Sbjct 773348 CTCTACGATCTCTGTGCACAGGTTGCTGGATTTGATGGTGCCCAGGTTCTGCTGGTTGCT 773289
Query 79158 CTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTC 79205
|||| | || ||||| |||||||| ||||||||| || || || ||
Sbjct 773288 CTTCCCATTGCAGGCATCCTTGTAAAGCATGTACGGGGTTCCCGTTTC 773241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548481644811360
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