Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq52 116 5e-21 >seq52 Length=2291593 Score = 116 bits (128), Expect = 5e-21 Identities = 238/351 (68%), Gaps = 2/351 (1%) Strand=Plus/Plus Query 13692 GAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTC 13751 || |||||||| || |||||||| || || || | ||||| |||||||| ||||| || Sbjct 381543 GACTTTCCCATTGCTTACTCGATGGTAATTCATGAGAAGATTGAGATGTTTGAGCGACTT 381602 Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTCCGGC 13811 || | || || || || || |||||| ||||||| || || |||||| || ||| Sbjct 381603 CTACGAGCTATTTATGCTCCTCAGAACATCTACTGTGTGCATGTGGACAGGAAATCCTCA 381662 Query 13812 GACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAACGTGGCCCTGGCC 13871 || | || | | || || || | ||||| ||||| ||| | ||| Sbjct 381663 GAAAAATTTAGGATAGCAGTGGAGGAAATTATCTCCTGCTTTCCTAATGTGTTTATAGCC 381722 Query 13872 CACCGGCT-GCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCTG 13930 | | | | | || ||||| || | || ||| ||| |||||||| || | | ||| Sbjct 381723 AGCAGATTAGAAAGA-GTGGTATATGCTTCATGGTCTCGGGTGCAGGCAGATTTAAACTG 381781 Query 13931 CATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGCGGGAT 13990 |||| || ||| ||| | | || |||||||||||||||| ||| || |||| Sbjct 381782 CATGGAAGATCTGCTGAGCTCACACATCCAGTGGAGGTACCTGCTTAACACCTGTGGGAC 381841 Query 13991 GGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGCCCT 14041 |||||||| |||| |||||| ||||| || | |||||||| |||||| Sbjct 381842 AGACTTCCCCATCAAAACCAACAGAGAGATGGTTCAGGCGCTGACGGCCCT 381892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658687373693440