Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq331 98.7 6e-16
>seq331
Length=323222
Score = 98.7 bits (108), Expect = 6e-16
Identities = 162/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| || ||||||| || | ||||| ||| |||||| || ||||| || || ||
Sbjct 7702 CCGCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 7761
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | ||||| || || || |||||||| || | | ||| ||||| || ||
Sbjct 7762 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 7821
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| || ||||| || |||||| | || ||| | ||| ||||| | ||| ||
Sbjct 7822 ATGCCTTCCTTATCCTGGATCTTG-GCCTTGACGTTCTCAATGGTGTCACTGGGCTCGAC 7880
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709
|| | ||| || || || ||||| | || |||||||| |||||||||||
Sbjct 7881 CTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATGTT 7931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314705457682502
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |