Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq331 98.7 9e-16 >seq331 Length=323222 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27006 ACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTC 27065 || |||||||||||| | || || ||||| || || || ||| | ||||||| ||| Sbjct 11485 ACCCTGACCGGCAAGACCATCACCCTTGAGGTTGAGCCAAGTGACACTATTGAGAATGTC 11426 Query 27066 AAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCC 27125 || || || || || || |||||||| || || || || ||| | | || | ||| Sbjct 11425 AAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCTGACCAGCAGAGGCTGATCTTTGCC 11366 Query 27126 GGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACC 27185 ||||| ||| ||||||| | ||| | ||||| ||||| || || |||||||| ||| Sbjct 11365 GGCAAGCAACTGGAAGATGGCCGCACCCTCTCCGACTACAATATCCAGAAGGAGTCCACC 11306 Query 27186 TTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 | || | || ||||| || |||| || Sbjct 11305 CTCCACCTTGTCCTGCGTCTGAGGGGCGG 11277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434884182794880