Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_028943.1 Length=29237 Score E Sequences producing significant alignments: (Bits) Value seq2742 131 3e-26 >seq2742 Length=6849 Score = 131 bits (144), Expect = 3e-26 Identities = 288/431 (67%), Gaps = 12/431 (3%) Strand=Plus/Minus Query 9229 TCACCCGACCAGAACGGGTAGGCGTCGTGCGCCAGCGTGGACGGGGTGGAGAAATAGGTC 9288 || || | |||| |||| || || | ||||| | || | || |||||||| |||||| Sbjct 1565 TCGCCGGTCCAGTACGGATATGCCTGGTGCGTTACCGCGCTGGGCGTGGAGAAGTAGGTC 1506 Query 9289 GAGCGCAGGTGACTCTGTGAGGCCATACCTGATGCCACCTTACGCAGTACCTGAAAATTC 9348 |||| | || |||||||| | |||||| | |||| ||| ||||| Sbjct 1505 AGGCGCCACTTTGCATGCGAGGCCATCGCGCTGGCCACCGTCTGCAGCTTCTGGAAATTG 1446 Query 9349 GGTATCCAGAAAATCTCGTCGACGTACAGGTCGCCGTTATGGCTCTGCGCGGTGTTGGAG 9408 || |||||||| | ||||||| ||| | || ||||| | ||||||||| |||||| | Sbjct 1445 GGGATCCAGAACACTTCGTCGATGTAGACGTGGCCGTGGTAGCTCTGCGCCGTGTTGCTG 1386 Query 9409 TTGGTGCCGAGAAAAATCAGTTTTGC---------GCCGTTATTGCCCAGGACAATCGGG 9459 || || |||||| ||||| || ||||| |||| || || || || Sbjct 1385 TTCGTCGAGAGAAACCGCAGTTCCGCCCACGGCTTGCCGTCTTTGCTCAAGATGATGGGA 1326 Query 9460 TCACCGGTCAGGTCAACGTC-AACCA--GCCGGGCAAAGGCGATGATGTATTCGCGGAAC 9516 | |||| ||| || | || ||||| || ||| || |||| |||||| ||||||| Sbjct 1325 TTGCCGGACAGCTCGATATCGAACCATTGCGCGGCGAACGCGACGATGTAGCTGCGGAAC 1266 Query 9517 ACATACGCCTGCGTTTTACTGGCCGACAGAAAAATCTGGTTATGACCGGTTTTCAGGGCG 9576 || | | ||| | || || ||||| ||||||||||| | ||||| || ||| Sbjct 1265 ACTTCGGACTGGGCGCGGCTCGCGGACAGGAAAATCTGGTTGTCCCCGGTCAGCACTGCG 1206 Query 9577 CGCAGCAGCGCCTCGCGGGAAAAATAAAACGTCGCGCCAATCTGGCGGGATTTCAGGATA 9636 || | ||| ||| || || || | ||| || |||||||| || ||||||||| Sbjct 1205 TCCATGAACGCTTCGGCGGCGAAGTAGTAGGTCAGCCCGATCTGGCGCGACTTCAGGATA 1146 Query 9637 TCGCGGATGCG 9647 | |||||| || Sbjct 1145 TGGCGGATCCG 1135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 93429816416772