Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_029003.2
Length=29733
Score E
Sequences producing significant alignments: (Bits) Value
seq2742 116 7e-22
>seq2742
Length=6849
Score = 116 bits (128), Expect = 7e-22
Identities = 651/1011 (64%), Gaps = 57/1011 (6%)
Strand=Plus/Minus
Query 1555 CACCAACTGGAATACACCGAGACCGAGGCCTGTTGCGTCAATGCCGATGTATTCGACGTT 1614
||||| | ||| || ||| ||||| ||| || ||| |||||||||| | ||||||
Sbjct 2118 CACCAGGTCGAACACCCCGTAACCGACGCCGGTAATGTCGATGCCGATGTGCTGGACGTT 2059
Query 1615 GTATTTCTCAGTGAGCCTGCGGATG-GCTTCTGCCTGC-GCGGCAAAGTCCATGCCTTTC 1672
| | ||| ||| | ||| |||| |||||| ||| || | | | || |
Sbjct 2058 GAAGCGCTCGCACAGCTTCTCGATCTGCTT-TGCCTGATGCGTGAACGACG-TCCCCCGC 2001
Query 1673 CACTGGTGACGCTCCAGCATGCGAAACTTGCCACCCGAAACCACCGGCGGCGCGAGTACG 1732
|| ||| |||||| || || |||||||| |||| ||| ||||| || | ||
Sbjct 2000 CAGCTGTGCTTCTCCAGGATTCGGAACTTGCCGCCCGGCTCCAGGGGCGGGGCAACGACA 1941
Query 1733 ACACATCCGGCACTGTCGCCG-GTGTGGGAC--GGGTCGTAGCCAATCCAGACCGGGCGC 1789
|| || || | | |||| || | || ||| ||||| || || | ||||||||||||
Sbjct 1940 ACGCA--CGTCGC-GTCGTCGCGGGTTCGACTGGGGTCATACCCGAGCCAGACCGGGCGG 1884
Query 1790 GAGCCGAATGGATGGTCGGCGAACGGGGCGAAGTCCTCCCATGTTTCCATCACGTCGACC 1849
| |||| || | | | |||| || |||| |||| ||| || ||
Sbjct 1883 TTGTCGAACGGCCGCGGGCTGTCCGGGTCGTAGTCAGTCCATAGGCCCAAGTCG--GAAT 1826
Query 1850 ATGCAGCGCTGCAGCTCCTCGAACGGGAATACCGA-TGCCTTATCGTCGACAAACTCGCA 1908
| |||||||| ||| || || | |||| | | || | | ||||| |||| |||
Sbjct 1825 A-GCAGCGCTCCAGGTCGGTCAAGGCGAATGCAGCCTGGGTGCT-GTCGATGAACTTGCA 1768
Query 1909 CATAAACAGGTTCTTAAAGTCCTCATCACTGTTTTCGCGTCTG-AGCTGGTCGAGGTCGA 1967
||| ||||| | | ||| ||| || || || | ||| || | || |||||||
Sbjct 1767 CATGAACAGCTGTTCGAAGCGCTCTTCGTCGTACTCCAG-CTGCAGGCGCTCCAGGTCGA 1709
Query 1968 ACAGGGTGCAGCCACCGGCAAGGGCGTCCTCAATAGTGACAATCTGCCGCCACTGTCCGT 2027
||||| ||||||| ||||| | |||||| | ||| |||| | || |||||||| ||||
Sbjct 1708 ACAGGTTGCAGCCGCCGGCGATGGCGTCTTGAATCGTGATGACCTTGCGCCACTGCCCGT 1649
Query 2028 CAGCGCAAAGAAGCCCACCGGC---GAGC-GCGCTGTGACTGATGTCGATTTCGATGCGG 2083
| | ||| | | | ||||| || | ||||| | ||| | | | || |||
Sbjct 1648 CCGGGCACAA---CGCGCCGGCATGGATCTGCGCTTCG-CTG--GGCCA---CGGCCCGG 1598
Query 2084 TCAGCGGCACTGGCGCGCCCCTTGTTG---AACAGCTCGCCAGACCAGAAGGGGTAAGCG 2140
| | | ||||| ||||| ||| |||||| | |||| | || || ||
Sbjct 1597 CCTTCT----TTCCGCGCTTGCTGTTGCGGAACTCCTCGCCGGTCCAGTACGGATATGCC 1542
Query 2141 CCGTGCGCCAGCGTGGAAGGTGTCGAAAAGTAAGTTGAGCGCAGATGCTTT---TGCGAG 2197
||||| | || | || || || ||||| || |||| |||| ||||||
Sbjct 1541 TGGTGCGTTACCGCGCTGGGCGTGGAGAAGTAGGTCAGGCGCCA---CTTTGCATGCGAG 1485
Query 2198 GCCATGCCCGATG-CGACTTTGCGCAGCTTCTGAAAATTCGGGATCCAGAATATTTCATC 2256
||||| | || || | || | |||||||||| ||||| ||||||||||| | ||| ||
Sbjct 1484 GCCAT-CGCGCTGGCCACCGTCTGCAGCTTCTGGAAATTGGGGATCCAGAACACTTCGTC 1426
Query 2257 GACATACAGGTCGCCGTTATGGCTCTGTGCGGTGTTGGAATTGGTGCCGAGAAAAATCAG 2316
|| || | || ||||| | |||||| || |||||| || || |||||| |||
Sbjct 1425 GATGTAGACGTGGCCGTGGTAGCTCTGCGCCGTGTTGCTGTTCGTCGAGAGAAACCGCAG 1366
Query 2317 CTTTGC---------GCCGTTGTTGCCGATGACAATCGGGTCGCCGGTCAGGTCGACGTC 2367
| || ||||| |||| | || || || | ||||| ||| |||| ||
Sbjct 1365 TTCCGCCCACGGCTTGCCGTCTTTGCTCAAGATGATGGGATTGCCGGACAGCTCGATATC 1306
Query 2368 -AACCAGT-CGC-GCAAACTGGATGATGTATTCCCGGAACACGTAAGCCTGCGTTTTACT 2424
||||| | ||| || ||| || |||||| |||||||| | | ||| | ||
Sbjct 1305 GAACCATTGCGCGGCGAACGCGACGATGTAGCTGCGGAACACTTCGGACTGGGCGCGGCT 1246
Query 2425 GGCCGACAGAAAAATCTGGTTATGGCCGGTCTTGAGCGCGCGCAGCAGTGCCTCGCGGGA 2484
|| ||||| ||||||||||| | |||||| | ||| || | || ||| ||
Sbjct 1245 CGCGGACAGGAAAATCTGGTTGTCCCCGGTCAGCACTGCGTCCATGAACGCTTCGGCGGC 1186
Query 2485 AAAGTAGAACGTCGCGCCAATCTGGCGGGATTTGAGAATATCGCGAATACG 2535
|||||| | ||| || |||||||| || || || |||| ||| || ||
Sbjct 1185 GAAGTAGTAGGTCAGCCCGATCTGGCGCGACTTCAGGATATGGCGGATCCG 1135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 95016897787460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |