Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq331 87.8 2e-12 >seq331 Length=323222 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || ||||| |||| || || || | || || ||||| Sbjct 7498 TGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGC 7557 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| ||||| || || | ||||||||||| ||| | || || || ||| ||| || Sbjct 7558 TTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGATCTTG 7617 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 |||| || | | || ||||| | ||| || |||| ||||| | || || || Sbjct 7618 GCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTGCCGGTG 7677 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || |||||||| ||||| Sbjct 7678 AGGGTCTTGACAAAGATCTGCAT 7700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429512650362422