Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq331 91.5 1e-13 >seq331 Length=323222 Score = 91.5 bits (100), Expect = 1e-13 Identities = 125/171 (73%), Gaps = 3/171 (2%) Strand=Plus/Minus Query 23606 TTAAA-ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGAC 23664 ||||| ||||||||||| || || |||||||| || || || ||||| || || || || Sbjct 13113 TTAAACATGCAGATTTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAG 13054 Query 23665 TCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCC 23723 ||| ||||| |||| ||| | || | |||| || ||||| ||||| | || || Sbjct 13053 CCCAGCGACACCATTGAGAATGTGAAGGCTAAAA-TTCAGGACAAGGAAGGCATTCCCCC 12995 Query 23724 AGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCAC 23774 || || ||| | | || ||||||||||| || |||||||| | ||||| Sbjct 12994 TGACCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCAC 12944 Score = 86.0 bits (94), Expect = 4e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| || || || |||||||| || || || ||||| || || || || || Sbjct 7931 AACATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGCCC 7872 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| |||| | | || || || || || ||||| | || || || Sbjct 7871 AGTGACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCCGAC 7812 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || ||| | | || ||||||||||| || |||||||| | ||||| | ||| ||| Sbjct 7811 CAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTAC 7752 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| || || |||||||| Sbjct 7751 AACATCCAGAAGGAGTCCAC 7732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337983671917352