Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq331 91.5 1e-13
>seq331
Length=323222
Score = 91.5 bits (100), Expect = 1e-13
Identities = 125/171 (73%), Gaps = 3/171 (2%)
Strand=Plus/Minus
Query 23606 TTAAA-ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGAC 23664
||||| ||||||||||| || || |||||||| || || || ||||| || || || ||
Sbjct 13113 TTAAACATGCAGATTTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAG 13054
Query 23665 TCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCC 23723
||| ||||| |||| ||| | || | |||| || ||||| ||||| | || ||
Sbjct 13053 CCCAGCGACACCATTGAGAATGTGAAGGCTAAAA-TTCAGGACAAGGAAGGCATTCCCCC 12995
Query 23724 AGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCAC 23774
|| || ||| | | || ||||||||||| || |||||||| | |||||
Sbjct 12994 TGACCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCAC 12944
Score = 86.0 bits (94), Expect = 4e-12
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||| || || || |||||||| || || || ||||| || || || || ||
Sbjct 7931 AACATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGCCC 7872
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| ||||| |||| | | || || || || || ||||| | || || ||
Sbjct 7871 AGTGACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCCGAC 7812
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | | || ||||||||||| || |||||||| | ||||| | ||| |||
Sbjct 7811 CAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTAC 7752
Query 23788 AACATACAAAAAGAGTCCAC 23807
||||| || || ||||||||
Sbjct 7751 AACATCCAGAAGGAGTCCAC 7732
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337983671917352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |