Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq95 150 1e-31 seq90 102 7e-17 >seq95 Length=1145539 Score = 150 bits (166), Expect = 1e-31 Identities = 131/163 (80%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || || |||| ||| || |||||||| || || || | ||||||||||| || || ||| Sbjct 863712 AGTCCTGTGATGTGTGCGATCATGTAGGTAAGAAGTGCATAGCTGGCGATATTGAAAGGC 863653 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 |||||||| ||||| || ||||| | |||||| ||||| ||||| ||||| || |||| | Sbjct 863652 ACCCCGAGGCCCATATCACCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCATCGCAC 863593 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGA 29876 ||||| |||||||||| ||| ||||| || || || ||||||| Sbjct 863592 ACGTAGAACTGACACAGGGCGTGGCAGGGGGGCAGAGCCATGA 863550 Score = 111 bits (122), Expect = 1e-19 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || || ||||||||||| || ||||| ||||||||||| || || || || | ||| Sbjct 862987 AAGTGTCTCCACTGGAAGCCATACACGGGTCCCAGGTCGCCTTCCTCTCTATCTGTGAAC 862928 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 || ||||||| ||||||| || |||||||||||||| ||||| || || ||||| Sbjct 862927 CCGAGATTGTCCAGGAAGTCTCGAGACCCGTTGGCGTCCCAAATCTTCACTCCTTTCTCA 862868 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCC 30162 |||||||| |||| ||||| || || Sbjct 862867 GAGAGCTCCTTGGCATTTGTTGATCC 862842 >seq90 Length=1194800 Score = 102 bits (112), Expect = 7e-17 Identities = 76/89 (85%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 114443 AGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATGTCTGGACACGCT 114502 ||||| || |||||||||||||| | ||| ||||||||||| |||| ||| |||||| | Sbjct 223833 AGTCTAACAGGATGCCACGGCAGCTTTCCATTGTTCCCGATACCCAGGTCAGGACACACC 223774 Query 114503 GCCACGATACCGTTCAGAATGAGGGGCAT 114531 ||||| ||||||||||||||| ||| ||| Sbjct 223773 GCCACAATACCGTTCAGAATGCGGGACAT 223745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406132043982484