Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq103 168 5e-37
seq95 152 4e-32
>seq103
Length=968675
Score = 168 bits (186), Expect = 5e-37
Identities = 230/321 (72%), Gaps = 0/321 (0%)
Strand=Plus/Minus
Query 68997 CACCTACACAGTCCAGAGGGGTCCAAACTGACCATAGGACCCGTTGAGGACACAGAGTAT 69056
||| || | ||||||| || ||| ||||| |||||| | | || ||||| ||
Sbjct 787302 CACTTAAAGAGTCCAGCTGGCACCACGCTGACGATAGGAAACCTGGATGACACCATATAC 787243
Query 69057 AAAGACAGGCCTGCAGTGGTGAACGGATGGGGAAAGTTTTATATCCCCACCGCCGTGACG 69116
||| | | |||| || |||||| || |||||||| || || |||| | || |
Sbjct 787242 AAACAGAAGCCTAGAGAGGTGAATGGGTGGGGAAAATTCTACCTCCCTGACATAGTAAAC 787183
Query 69117 ATGCAGGTCATCGGTTATGTGACGGGAACTCCATACCAATGTGACCAGCTTGTCCTGATG 69176
|||||||| || ||| ||| ||| || | | || ||||||||||| || ||||||
Sbjct 787182 ATGCAGGTTATAGGTGTAGTGGAGGGGACCTCGTGCCCGTGTGACCAGCTCGTTCTGATG 787123
Query 69177 ACCTGCGAGGACCAGAAGGTGTACGGCTATGACGGAGACGAGCTGCATGTGGTGGCTAAC 69236
||||| || ||| || || ||||||||||| ||||| ||||||||||||||||||
Sbjct 787122 ACCTGTGAAGACAGAAAAGTTTACGGCTATGATGGAGAAGAGCTGCATGTGGTGGCTGCA 787063
Query 69237 TGTCTGGATCAGATGGGGGAAGAAGGAATAGCCTATCCTGCATTCCAGAGCTATTATCAT 69296
| ||| || | | | || || |||| ||||| |||| | |||||||||| |
Sbjct 787062 AGCCTGATGGAGCTAGATCACGAGGGGATAGAGTATCCAGCATCCAAGAGCTATTACAAC 787003
Query 69297 GGGGAGGCCTTCAAACATATG 69317
|||||||||||||||||||||
Sbjct 787002 GGGGAGGCCTTCAAACATATG 786982
>seq95
Length=1145539
Score = 152 bits (168), Expect = 4e-32
Identities = 138/174 (79%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267
|| || |||| ||| || |||||||| || || || | ||||||||||| || || ||
Sbjct 863712 AGTCCTGTGATGTGTGCGATCATGTAGGTAAGAAGTGCATAGCTGGCGATATTGAAAGGC 863653
Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327
|||||||| ||||| || || || | |||||| ||||||||||| ||||| |||||||
Sbjct 863652 ACCCCGAGGCCCATATCACCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCATCGCAC 863593
Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCT 27381
||||| |||||||| | ||||||||| || || |||||||||| | || ||||
Sbjct 863592 ACGTAGAACTGACACAGGGCGTGGCAGGGGGGCAGAGCCATGAAGGGCAGGTCT 863539
Score = 132 bits (146), Expect = 4e-26
Identities = 130/168 (77%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548
|||||| ||||||||||| || || || ||||| ||||| || ||||| |||||||||||
Sbjct 863009 CATGTCTGTGTACTCTGCACCAAAGTGTCTCCACTGGAAGCCATACACGGGTCCCAGGTC 862950
Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608
|| || || || | ||| || ||||||| ||||||| || |||||||||||
Sbjct 862949 GCCTTCCTCTCTATCTGTGAACCCGAGATTGTCCAGGAAGTCTCGAGACCCGTTGGCGTC 862890
Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656
||| ||||| || || ||||| |||||||| |||| ||||| || ||
Sbjct 862889 CCAAATCTTCACTCCTTTCTCAGAGAGCTCCTTGGCATTTGTTGATCC 862842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369478855795514
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |