Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq120 178 4e-40 >seq120 Length=812315 Score = 178 bits (196), Expect = 4e-40 Identities = 197/260 (76%), Gaps = 2/260 (1%) Strand=Plus/Plus Query 33930 GAGCTGCTCGAATCGCGAGTACTTACCCAGGAACGCGCACCGGACAGTGCTTGGCTCGCC 33989 |||| || | || || | | ||| || | |||||| ||| || || | | || || Sbjct 51685 GAGCGGCACAAAACGAGTTTCCTTGCCAATAAACGCGGTCCGCACGGTACCGGTTTCACC 51744 Query 33990 GTTGCGGTGCTTCGCGATGATCAACTCAGCCACGCCGCGGTACTGGGTGTCCGGGTGATA 34049 ||| |||||||| ||| ||||||||| || || || ||||| |||||||||| || Sbjct 51745 GTTCCGGTGCTTGCCGAGGATCAACTCGGCAACCCCCTTGTACTCAGTGTCCGGGTTGTA 51804 Query 34050 GACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTC 34109 |||||||||||| || ||||||||||| | ||| ||||||||||||||||| |||||||| Sbjct 51805 GACCTCGTCTCGATAGACGAACATGATGATGTCCGCGTCCTGCTCGATCGCGCCGGACTC 51864 Query 34110 GCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTC-CAGGGAGCGGTTGAGCT 34168 |||| ||| | ||| || |||||||| ||||||||||| || | |||| | || Sbjct 51865 CCGCAAGTCTGCGTTCACAGGGCGCTTGTTGGGCCGCTGCTCACACTG-GCGGGACAACT 51923 Query 34169 GCGACAGCACGATCACGGGG 34188 |||| ||| |||| |||||| Sbjct 51924 GCGATAGCGCGATGACGGGG 51943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160452006720060