Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq67 497 1e-135
seq30 84.2 3e-11
>seq67
Length=1635559
Score = 497 bits (550), Expect = 1e-135
Identities = 1299/1966 (66%), Gaps = 33/1966 (2%)
Strand=Plus/Minus
Query 77061 TTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTA 77120
||||| || || || ||||||| |||||| || | || | || |||||||||||
Sbjct 33427 TTCTTCATCTCCTCGTTCCACAGCCCCCTCTCCGTCAGGTCTTTGAGCAGATGAGGATTC 33368
Query 77121 ACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 77180
|| || ||||| |||||||| | || || || ||||| || || ||||| || | |||
Sbjct 33367 ACGATCTGAAACTCTCCAGAGAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCG 33308
Query 77181 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAAT 77240
| ||| || ||||| |||| || || || || || || || ||||| || |||| || |
Sbjct 33307 ATAGACTCGTTGTTGCCCAGGATCTGTGCTGTGGAGGCCGTGGGCATCGGGGCCAGCAGT 33248
Query 77241 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 77300
| || || || | || ||| | ||| || || || || ||||| ||| | |||
Sbjct 33247 AGGCTGTTCCTCACGCCGTGTTTGGCGATCTTTTCCTTCAGCAGCTTCCAGTCCAACAGA 33188
Query 77301 TCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCA 77360
|| | || ||||| | ||||| || || || || || || | || ||
Sbjct 33187 TCGGTGGGCGTCTTCTCCCACATGTCGTACTGGAGGATCCCCTTGCTGACCGGAGAGCCT 33128
Query 77361 TTATATGTTTCATAAGGTCCT---TCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCT 77417
| || || || || || || || | | || || || || ||||| |||| ||
Sbjct 33127 TCGTACGTCTCGTAGGGGCCGAGCTCAG---CGGCCAGCTCGCAGCTCGCCTCCAGGGCG 33071
Query 77418 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAAC 77477
|||| || || || || || || | | || || || || || || ||||||
Sbjct 33070 GCGTAGTAGATGGTCTCAAAGATTTGGATGTTCAGCAGCTGCGCCTCGGGGCTTTCAAAC 33011
Query 77478 GGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTA 77537
|| ||| | | || || |||||||| || || || ||||| || || || || || ||
Sbjct 33010 GGGTAACGCATCAGGATGAAGGCATCCGCCAAACCTTGAACGCCGATTCCTATTGGCCTG 32951
Query 77538 TGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTA 77597
|| | ||| ||||| | | ||||| || | ||||| | ||||| || || || ||
Sbjct 32950 TGACGCTTGTTGGACTTCTCCGCTTCGGGCACTGGATAGAAGTTAATCTCGATGATCTTG 32891
Query 77598 TTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCA 77657
|| | ||||| |||| ||||| ||| |||||| ||| ||||| | |
Sbjct 32890 TTCAAGTTTCTGACAATGACTTTGGTCACAGATGCTAGTTTTTTAAAGTCAAAAGTCCGC 32831
Query 77658 TCTA---TAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTA 77714
|| | || ||||||| | || || || || |||||||| || ||||||||||
Sbjct 32830 TCAGGGGTGACGTACATGTTGAGCGCAATGGAGGCCAGATTACAGACCGCTACCTCATCG 32771
Query 77715 GCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTT 77774
|| ||| |||| | || || || || || || || | |||||| |||||||||||
Sbjct 32770 TCGCTGGTGTATTCAACGATTTCTGTGCAGAGGTTGCTGCTTTTGATTGTGCCCAGATTC 32711
Query 77775 TGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCA 77834
|| |||||||||||| ||||| | ||| || || || || |||| || ||||||||
Sbjct 32710 TGCTGGTTGCTCTTTCGGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCGGTTTCT 32651
Query 77835 ATCTGTGATTCGATAATAGATTTCCAGACGACT-CT-AGCTTTTATCATAGATTTGTATC 77892
|||| || || || || | | ||| || || || ||| || | || | ||| |
Sbjct 32650 GTCTGGGACTCAATGATGGCGTGCCACAC--CTGCTGAGCCTTCACCACACGCTTGACCC 32593
Query 77893 GCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCA 77952
|| ||| | |||||| ||| || ||| ||||| || || |||||| || ||||
Sbjct 32592 TCCCCTCCTTCTCATATGAAGTGTAGAGCTTCTCAAACTCCTCACCCCAACACTCGTCCA 32533
Query 77953 ATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTT-AACTCGTTTC 78011
|| || || ||||| || ||||||| |||||||| | | | || |||| |||
Sbjct 32532 GCCCGGGACACTCATTGGGACACATCAGAGACCAGTCTTGGT-TGCTTTCCACTCTCTTC 32474
Query 78012 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTT 78071
|| || | ||||| ||||| || || || || |||| || || || || || |||
Sbjct 32473 ATGAACAAGTCAGGGATCCACAGGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTT 32414
Query 78072 CCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 78131
||||| ||||| || || || || || || | | ||| | ||||| || || || ||
Sbjct 32413 CCTGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCGAAGTGCCACGGCTCCAGGTAC 32354
Query 78132 ATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTA 78191
|| || | |||| |||| ||| || || ||||| || | ||| | || ||||| ||
Sbjct 32353 ATGGCGAAGGCTCCGGGTCTTTTGTTGCCGCCCTGGTCGACATAACGCGCCGTGTTGTTG 32294
Query 78192 TAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTT 78251
|||||||||| ||| || | | ||||| || | || ||||| || | ||| || ||
Sbjct 32293 TAAACTCTCAGCATGGGGACTAACCCGTTTGAGTTGCCGTTTGTGCCGGCAATGTAGCTC 32234
Query 78252 CCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGA 78311
|| ||| | || || | | | || |||||||| ||| ||| || || ||
Sbjct 32233 CCTGTTGATCTGATGCAGCTGACAGCCACACCGATTCCTCCAGCCGACTTTGAGATGAGG 32174
Query 78312 GCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGA 78371
|| || | |||| || |||||||| || || || ||||| ||| ||||| || ||
Sbjct 32173 GCACACTGCTTCAGAGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGCGAGCAGG 32114
Query 78372 AAACAGCTAGACATTTGA----TGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGC 78427
|| ||||| |||| ||| || || || || ||||| || | || || || ||
Sbjct 32113 AAGCAGCTGGACAGCTGAGGCCTGTTG----GTACCGGCATTGAAGAGAGTAGGCGAGGC 32058
Query 78428 ATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCA 78487
|| || ||||| || || || || || ||||| || ||||| |||| || ||||||
Sbjct 32057 GTGGGTGAACCACTTCTCCGACAGCAGGTTGTAGGTCTCAATGGCTGCGTCGATGTCCGT 31998
Query 78488 TTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATT 78547
| || || || || | || | ||| | ||| ||||| |||| ||| || ||
Sbjct 31997 TCTGTGGATGCCAACAGAAACCCTCATGAGCATGTGCTGGGGTCGTTCGGCCACTTTGCC 31938
Query 78548 ATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 78607
|| || |||| || ||| || |||| ||| || || ||||| ||||||| || ||
Sbjct 31937 GTTGATCTTCAGCAGGTAGGACCGCTCCAGAGTCTTGAAGCCAAAGAAGTTGTAGGAGAA 31878
Query 78608 GTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATT--TGGTAACAATATCC 78665
||| | ||| |||| || | || || || ||||||| | ||| ||||| ||
Sbjct 31877 GTCACGGTCGAAAATGATGGCGGAGTTGAGGCGGTCTTTGTTCTCCTGG--ACAATGTCG 31820
Query 78666 ATGACAGTAGTT-GAAATAATAGGAGATCGTACACCATTTTTA--GGATTAACATAGTTA 78722
| | | || || || || ||||| || | || | || || ||||||||
Sbjct 31819 A-GCGTCTCCTTGGAGATCATGGGAGA--GTGGCGTTTGTTCAAGGGGTTGACATAGTTG 31763
Query 78723 AATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACA 78782
| | || ||||| || || || || | || || || || ||||| || || || ||
Sbjct 31762 TACAGGTCCTCCATCACGTCGCTGAACACCTTCTTGGTCTCTTTGTGCAGGTTTGAGACG 31703
Query 78783 GCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATT 78842
|| || | ||||| || || ||||| || || |||| || || |||||| || ||
Sbjct 31702 GCGATCCGAGCAGCGAGGATTGCATAGTCGGGGTGTTTGGTTGTGAGAGTGGCGGCGATC 31643
Query 78843 TCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACT 78902
|| ||||| | | || | ||| | || ||||| || | || | || ||||| ||
Sbjct 31642 TCAGCCGCCAGCGTGTCGAGCTCCACGGTGGTGACGCCGCTGTACAAACCCTGAATCACC 31583
Query 78903 TTCATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTTTCTA 78962
||||| | || | | | ||||| ||||| |||| ||||| || || || | ||
Sbjct 31582 TTCATCGTAATCTGGGCTGGATCCACAAAGTCAGAGTTCAGCCCGTAGCACAGCTTCTGG 31523
Query 78963 ATACGAGATGTGATTTTATCAAATATAACATTCTCCTTGCATCCAT 79008
|| || || ||||||||||| || || || ||||| || |||||
Sbjct 31522 ATGCGGGAGGTGATTTTATCGAACATGACGCGCTCCTGGCGTCCAT 31477
>seq30
Length=3550406
Score = 84.2 bits (92), Expect = 3e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 77733 ATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTA 77792
||||| || || || || || ||||||| |||||||| || || ||||||||||| |
Sbjct 773341 ATCTCTGTGCACAGGTTGCTGGATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCCA 773282
Query 77793 TTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAAT 77851
||||| | ||||| ||||| || |||| || || ||||| |||| || ||||| ||
Sbjct 773281 TTGCAGGCATCCTTGTAAAGCATGTACGGGGTTCCCGTTTCCGTCTGAGACTCGATGAT 773223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694614146932160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |