Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq67 497 1e-135 seq30 84.2 3e-11 >seq67 Length=1635559 Score = 497 bits (550), Expect = 1e-135 Identities = 1299/1966 (66%), Gaps = 33/1966 (2%) Strand=Plus/Minus Query 77061 TTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTA 77120 ||||| || || || ||||||| |||||| || | || | || ||||||||||| Sbjct 33427 TTCTTCATCTCCTCGTTCCACAGCCCCCTCTCCGTCAGGTCTTTGAGCAGATGAGGATTC 33368 Query 77121 ACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 77180 || || ||||| |||||||| | || || || ||||| || || ||||| || | ||| Sbjct 33367 ACGATCTGAAACTCTCCAGAGAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCG 33308 Query 77181 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAAT 77240 | ||| || ||||| |||| || || || || || || || ||||| || |||| || | Sbjct 33307 ATAGACTCGTTGTTGCCCAGGATCTGTGCTGTGGAGGCCGTGGGCATCGGGGCCAGCAGT 33248 Query 77241 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 77300 | || || || | || ||| | ||| || || || || ||||| ||| | ||| Sbjct 33247 AGGCTGTTCCTCACGCCGTGTTTGGCGATCTTTTCCTTCAGCAGCTTCCAGTCCAACAGA 33188 Query 77301 TCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCA 77360 || | || ||||| | ||||| || || || || || || | || || Sbjct 33187 TCGGTGGGCGTCTTCTCCCACATGTCGTACTGGAGGATCCCCTTGCTGACCGGAGAGCCT 33128 Query 77361 TTATATGTTTCATAAGGTCCT---TCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCT 77417 | || || || || || || || | | || || || || ||||| |||| || Sbjct 33127 TCGTACGTCTCGTAGGGGCCGAGCTCAG---CGGCCAGCTCGCAGCTCGCCTCCAGGGCG 33071 Query 77418 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAAC 77477 |||| || || || || || || | | || || || || || || |||||| Sbjct 33070 GCGTAGTAGATGGTCTCAAAGATTTGGATGTTCAGCAGCTGCGCCTCGGGGCTTTCAAAC 33011 Query 77478 GGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTA 77537 || ||| | | || || |||||||| || || || ||||| || || || || || || Sbjct 33010 GGGTAACGCATCAGGATGAAGGCATCCGCCAAACCTTGAACGCCGATTCCTATTGGCCTG 32951 Query 77538 TGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTA 77597 || | ||| ||||| | | ||||| || | ||||| | ||||| || || || || Sbjct 32950 TGACGCTTGTTGGACTTCTCCGCTTCGGGCACTGGATAGAAGTTAATCTCGATGATCTTG 32891 Query 77598 TTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCA 77657 || | ||||| |||| ||||| ||| |||||| ||| ||||| | | Sbjct 32890 TTCAAGTTTCTGACAATGACTTTGGTCACAGATGCTAGTTTTTTAAAGTCAAAAGTCCGC 32831 Query 77658 TCTA---TAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTA 77714 || | || ||||||| | || || || || |||||||| || |||||||||| Sbjct 32830 TCAGGGGTGACGTACATGTTGAGCGCAATGGAGGCCAGATTACAGACCGCTACCTCATCG 32771 Query 77715 GCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTT 77774 || ||| |||| | || || || || || || || | |||||| ||||||||||| Sbjct 32770 TCGCTGGTGTATTCAACGATTTCTGTGCAGAGGTTGCTGCTTTTGATTGTGCCCAGATTC 32711 Query 77775 TGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCA 77834 || |||||||||||| ||||| | ||| || || || || |||| || |||||||| Sbjct 32710 TGCTGGTTGCTCTTTCGGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCGGTTTCT 32651 Query 77835 ATCTGTGATTCGATAATAGATTTCCAGACGACT-CT-AGCTTTTATCATAGATTTGTATC 77892 |||| || || || || | | ||| || || || ||| || | || | ||| | Sbjct 32650 GTCTGGGACTCAATGATGGCGTGCCACAC--CTGCTGAGCCTTCACCACACGCTTGACCC 32593 Query 77893 GCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCA 77952 || ||| | |||||| ||| || ||| ||||| || || |||||| || |||| Sbjct 32592 TCCCCTCCTTCTCATATGAAGTGTAGAGCTTCTCAAACTCCTCACCCCAACACTCGTCCA 32533 Query 77953 ATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTT-AACTCGTTTC 78011 || || || ||||| || ||||||| |||||||| | | | || |||| ||| Sbjct 32532 GCCCGGGACACTCATTGGGACACATCAGAGACCAGTCTTGGT-TGCTTTCCACTCTCTTC 32474 Query 78012 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTT 78071 || || | ||||| ||||| || || || || |||| || || || || || ||| Sbjct 32473 ATGAACAAGTCAGGGATCCACAGGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTT 32414 Query 78072 CCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 78131 ||||| ||||| || || || || || || | | ||| | ||||| || || || || Sbjct 32413 CCTGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCGAAGTGCCACGGCTCCAGGTAC 32354 Query 78132 ATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTA 78191 || || | |||| |||| ||| || || ||||| || | ||| | || ||||| || Sbjct 32353 ATGGCGAAGGCTCCGGGTCTTTTGTTGCCGCCCTGGTCGACATAACGCGCCGTGTTGTTG 32294 Query 78192 TAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTT 78251 |||||||||| ||| || | | ||||| || | || ||||| || | ||| || || Sbjct 32293 TAAACTCTCAGCATGGGGACTAACCCGTTTGAGTTGCCGTTTGTGCCGGCAATGTAGCTC 32234 Query 78252 CCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGA 78311 || ||| | || || | | | || |||||||| ||| ||| || || || Sbjct 32233 CCTGTTGATCTGATGCAGCTGACAGCCACACCGATTCCTCCAGCCGACTTTGAGATGAGG 32174 Query 78312 GCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGA 78371 || || | |||| || |||||||| || || || ||||| ||| ||||| || || Sbjct 32173 GCACACTGCTTCAGAGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGCGAGCAGG 32114 Query 78372 AAACAGCTAGACATTTGA----TGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGC 78427 || ||||| |||| ||| || || || || ||||| || | || || || || Sbjct 32113 AAGCAGCTGGACAGCTGAGGCCTGTTG----GTACCGGCATTGAAGAGAGTAGGCGAGGC 32058 Query 78428 ATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCA 78487 || || ||||| || || || || || ||||| || ||||| |||| || |||||| Sbjct 32057 GTGGGTGAACCACTTCTCCGACAGCAGGTTGTAGGTCTCAATGGCTGCGTCGATGTCCGT 31998 Query 78488 TTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATT 78547 | || || || || | || | ||| | ||| ||||| |||| ||| || || Sbjct 31997 TCTGTGGATGCCAACAGAAACCCTCATGAGCATGTGCTGGGGTCGTTCGGCCACTTTGCC 31938 Query 78548 ATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 78607 || || |||| || ||| || |||| ||| || || ||||| ||||||| || || Sbjct 31937 GTTGATCTTCAGCAGGTAGGACCGCTCCAGAGTCTTGAAGCCAAAGAAGTTGTAGGAGAA 31878 Query 78608 GTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATT--TGGTAACAATATCC 78665 ||| | ||| |||| || | || || || ||||||| | ||| ||||| || Sbjct 31877 GTCACGGTCGAAAATGATGGCGGAGTTGAGGCGGTCTTTGTTCTCCTGG--ACAATGTCG 31820 Query 78666 ATGACAGTAGTT-GAAATAATAGGAGATCGTACACCATTTTTA--GGATTAACATAGTTA 78722 | | | || || || || ||||| || | || | || || |||||||| Sbjct 31819 A-GCGTCTCCTTGGAGATCATGGGAGA--GTGGCGTTTGTTCAAGGGGTTGACATAGTTG 31763 Query 78723 AATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACA 78782 | | || ||||| || || || || | || || || || ||||| || || || || Sbjct 31762 TACAGGTCCTCCATCACGTCGCTGAACACCTTCTTGGTCTCTTTGTGCAGGTTTGAGACG 31703 Query 78783 GCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATT 78842 || || | ||||| || || ||||| || || |||| || || |||||| || || Sbjct 31702 GCGATCCGAGCAGCGAGGATTGCATAGTCGGGGTGTTTGGTTGTGAGAGTGGCGGCGATC 31643 Query 78843 TCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACT 78902 || ||||| | | || | ||| | || ||||| || | || | || ||||| || Sbjct 31642 TCAGCCGCCAGCGTGTCGAGCTCCACGGTGGTGACGCCGCTGTACAAACCCTGAATCACC 31583 Query 78903 TTCATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTTTCTA 78962 ||||| | || | | | ||||| ||||| |||| ||||| || || || | || Sbjct 31582 TTCATCGTAATCTGGGCTGGATCCACAAAGTCAGAGTTCAGCCCGTAGCACAGCTTCTGG 31523 Query 78963 ATACGAGATGTGATTTTATCAAATATAACATTCTCCTTGCATCCAT 79008 || || || ||||||||||| || || || ||||| || ||||| Sbjct 31522 ATGCGGGAGGTGATTTTATCGAACATGACGCGCTCCTGGCGTCCAT 31477 >seq30 Length=3550406 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 77733 ATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTA 77792 ||||| || || || || || ||||||| |||||||| || || ||||||||||| | Sbjct 773341 ATCTCTGTGCACAGGTTGCTGGATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCCA 773282 Query 77793 TTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAAT 77851 ||||| | ||||| ||||| || |||| || || ||||| |||| || ||||| || Sbjct 773281 TTGCAGGCATCCTTGTAAAGCATGTACGGGGTTCCCGTTTCCGTCTGAGACTCGATGAT 773223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694614146932160