Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq67 509 2e-139 seq508 89.7 7e-13 >seq67 Length=1635559 Score = 509 bits (564), Expect = 2e-139 Identities = 1301/1966 (66%), Gaps = 33/1966 (2%) Strand=Plus/Minus Query 75656 TTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTA 75715 ||||| ||||| || ||||||| ||||| || | || | || ||||||||||| Sbjct 33427 TTCTTCATCTCCTCGTTCCACAGCCCCCTCTCCGTCAGGTCTTTGAGCAGATGAGGATTC 33368 Query 75716 ACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCC 75775 || || ||||| |||||||| | || || || ||||| || || ||||| || | ||| Sbjct 33367 ACGATCTGAAACTCTCCAGAGAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCG 33308 Query 75776 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAAT 75835 | ||| || ||||| |||| || || || || || || || ||||| || |||| || | Sbjct 33307 ATAGACTCGTTGTTGCCCAGGATCTGTGCTGTGGAGGCCGTGGGCATCGGGGCCAGCAGT 33248 Query 75836 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 75895 | || || || | || ||| | ||| || || || || ||||| ||| | ||| Sbjct 33247 AGGCTGTTCCTCACGCCGTGTTTGGCGATCTTTTCCTTCAGCAGCTTCCAGTCCAACAGA 33188 Query 75896 TCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCA 75955 || | || ||||| | ||||| || || || || ||||| | || || Sbjct 33187 TCGGTGGGCGTCTTCTCCCACATGTCGTACTGGAGGATCCCCTTGCTGACCGGAGAGCCT 33128 Query 75956 TTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCG 76015 | || || ||||| | ||| || | || || ||||| |||||||| | || || Sbjct 33127 TCGTACGTCTCGTAGGGGCCGAGCTCAGCGGCCAGCTCGCAGCTCGCCTCCAGGGCGGCG 33068 Query 76016 TAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGA 76075 || || || || || || || | | || || ||||| || | || ||||| || Sbjct 33067 TAGTAGATGGTCTCAAAGATTTGGATGTTCAGCAGCTGCGCCTCGGGGCTTTCAAACGGG 33008 Query 76076 TAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGT 76135 ||| | | || || || ||||| || | || ||||| || || || || || || || Sbjct 33007 TAACGCATCAGGATGAAGGCATCCGCCAAACCTTGAACGCCGATTCCTATTGGCCTGTGA 32948 Query 76136 CTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTG 76195 | ||| ||||| | || ||||| || | || || | ||||| || || || || || Sbjct 32947 CGCTTGTTGGACTTCTCCGCTTCGGGCACTGGATAGAAGTTAATCTCGATGATCTTGTTC 32888 Query 76196 AGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTC---CA 76252 | |||||||||| ||||| ||| |||||| ||| ||||| | | || Sbjct 32887 AAGTTTCTGACAATGACTTTGGTCACAGATGCTAGTTTTTTAAAGTCAAAAGTCCGCTCA 32828 Query 76253 TCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCA 76312 | || |||| || || || || || || |||||||| || |||||||||| | Sbjct 32827 GGGGTGACGTACATGTTGAGCGCAATGGAGGCCAGATTACAGACCGCTACCTCATCGTCG 32768 Query 76313 TTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGT 76372 ||| |||| | || || ||||| || || || | ||||| || || ||||| || Sbjct 32767 CTGGTGTATTCAACGATTTCTGTGCAGAGGTTGCTGCTTTTGATTGTGCCCAGATTCTGC 32708 Query 76373 TGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATC 76432 |||||||||||| ||| || | ||| || || || | |||| || || ||||| || Sbjct 32707 TGGTTGCTCTTTCGGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCGGTTTCTGTC 32648 Query 76433 TGTGATTCGATAATAGATTTCCAGACGACT-CT-AGCTTTTATTATAGATTTGTATCGCT 76490 || || || || || | | ||| || || || ||| || | | | ||| | | Sbjct 32647 TGGGACTCAATGATGGCGTGCCACAC--CTGCTGAGCCTTCACCACACGCTTGACCCTCC 32590 Query 76491 TCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAAC 76550 ||| | |||||| || || | | ||||| || || |||||| || |||| | Sbjct 32589 CCTCCTTCTCATATGAAGTGTAGAGCTTCTCAAACTCCTCACCCCAACACTCGTCCAGCC 32530 Query 76551 CAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTT-AACCCGTTTCATA 76609 | ||||| ||||| |||||||||| ||||| || | | | || || | ||||| Sbjct 32529 CGGGACACTCATTGGGACACATCAGAGACCAGTCTTGGT-TGCTTTCCACTCTCTTCATG 32471 Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669 || | ||||| ||||| || || || || |||| || || | || || |||||| Sbjct 32470 AACAAGTCAGGGATCCACAGGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCT 32411 Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729 || ||||| || || || ||||| || | | ||| | ||||| || || || || || Sbjct 32410 GTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCGAAGTGCCACGGCTCCAGGTACATG 32351 Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789 || | | || |||| ||| || || ||||| || | ||| | || ||||| || ||| Sbjct 32350 GCGAAGGCTCCGGGTCTTTTGTTGCCGCCCTGGTCGACATAACGCGCCGTGTTGTTGTAA 32291 Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCA 76849 ||||||| ||| || | | ||||| || | || ||||| || | ||| || || || Sbjct 32290 ACTCTCAGCATGGGGACTAACCCGTTTGAGTTGCCGTTTGTGCCGGCAATGTAGCTCCCT 32231 Query 76850 CATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 76909 || | || || | || | || |||||||| ||| || ||||| || ||| Sbjct 32230 GTTGATCTGATGCAGCTGACAGCCACACCGATTCCTCCAGCCGACTTTGAGATGAGGGCA 32171 Query 76910 CAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAA 76969 || | |||| ||||| |||||||| || || || || ||| ||||| || || || Sbjct 32170 CACTGCTTCAGAGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGCGAGCAGGAAG 32111 Query 76970 CAGCTAGACATTTGA----TGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATG 77025 ||||| |||| ||| || || || || ||||| || | ||||| || || || Sbjct 32110 CAGCTGGACAGCTGAGGCCTGTTG----GTACCGGCATTGAAGAGAGTAGGCGAGGCGTG 32055 Query 77026 AGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTG 77085 |||||||| || || || || || ||||| || ||||| |||| || || ||| | Sbjct 32054 GGTGAACCACTTCTCCGACAGCAGGTTGTAGGTCTCAATGGCTGCGTCGATGTCCGTTCT 31995 Query 77086 ATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATT 77145 || || || |||| || | ||| | ||| ||||| |||||||| | || || Sbjct 31994 GTGGATGCCAACAGAAACCCTCATGAGCATGTGCTGGGGTCGTTCGGCCACTTTGCCGTT 31935 Query 77146 TATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 77205 || |||| || ||| || |||| ||| || || ||||| ||||||| || ||||| Sbjct 31934 GATCTTCAGCAGGTAGGACCGCTCCAGAGTCTTGAAGCCAAAGAAGTTGTAGGAGAAGTC 31875 Query 77206 TCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATT--TGGTAACAATATCCATG 77263 | ||| |||| || | || || || ||| || | | ||| ||||| || | Sbjct 31874 ACGGTCGAAAATGATGGCGGAGTTGAGGCGGTCTTTGTTCTCCTGG--ACAATGTC---G 31820 Query 77264 ACAGT---GGTAGAAATAATTGGAGA-TCGTATTCCATTTTTA--GGATTAACATAGTTA 77317 | || | || || || ||||| | | || | || | || || |||||||| Sbjct 31819 AGCGTCTCCTTGGAGATCATGGGAGAGTGGCGTT---TGTTCAAGGGGTTGACATAGTTG 31763 Query 77318 AATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACG 77377 | | ||| ||||| |||||||| || | || || || || ||||| || || || ||| Sbjct 31762 TACAGGTCCTCCATCACGTCGCTGAACACCTTCTTGGTCTCTTTGTGCAGGTTTGAGACG 31703 Query 77378 GCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATT 77437 || || | |||||| || ||||||||||| || |||| || ||| ||||| || || Sbjct 31702 GCGATCCGAGCAGCGAGGATTGCATAGTCGGGGTGTTTGGTTGTGAGAGTGGCGGCGATC 31643 Query 77438 TCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACT 77497 || ||||| | || || | || | || || || ||| | || | || ||||| || Sbjct 31642 TCAGCCGCCAGCGTGTCGAGCTCCACGGTGGTGACGCCGCTGTACAAACCCTGAATCACC 31583 Query 77498 TTCATGGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATTTTCTA 77557 ||||| | || | | ||||| ||||| || | ||||| || || || | || Sbjct 31582 TTCATCGTAATCTGGGCTGGATCCACAAAGTCAGAGTTCAGCCCGTAGCACAGCTTCTGG 31523 Query 77558 ATACGAGATGTGATTTTATCAAACATGACATTCTCCTTACATCCAT 77603 || || || ||||||||||| |||||||| ||||| | ||||| Sbjct 31522 ATGCGGGAGGTGATTTTATCGAACATGACGCGCTCCTGGCGTCCAT 31477 >seq508 Length=211378 Score = 89.7 bits (98), Expect = 7e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 ||||| || ||||| | || || || || || || ||||||||||| || | ||| ||| Sbjct 169633 TCATCCCTGCTAATCAGCTCATTGGAGAAGGTAAGACCAGGCATTAGCCCTCTCTTCTTG 169574 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 |||||| | || || ||||| || || || ||||| || || || || || ||||| || Sbjct 169573 AGCCAATAGATGGCAGCGAATGAGCCTGAGAAGAAGATACCCTCCACTGCTGCGAAAGCC 169514 Query 46774 ACAAGTCTCTCTCC 46787 || | |||||| || Sbjct 169513 ACGATTCTCTCCCC 169500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712878309886080