Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_031048.1 Length=41918 Score E Sequences producing significant alignments: (Bits) Value seq120 113 1e-20 >seq120 Length=812315 Score = 113 bits (124), Expect = 1e-20 Identities = 193/279 (69%), Gaps = 6/279 (2%) Strand=Plus/Minus Query 26906 CGGCCATTCAT---GCCCACGTTGATTTCAGTGGTGTAGCGCTCAACGCCTTGCTGATCA 26962 |||||||||| | | ||| ||| || ||||||||||| | || || | | || Sbjct 48478 CGGCCATTCACCTGGTCGACGACGATCTCGGTGGTGTAGCGTTTCACTCCGTCTTTTTC- 48420 Query 26963 GTCCATTTACGGGTTCGCAGACCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTAT 27022 ||| | ||||| || ||| |||||| | | | || ||| ||||| ||||| || Sbjct 48419 --CCACTCGCGGGTGCGGAGAGTGCCTTCGACGTAGCACTGGCTCCCTTTTCGCAGATAC 48362 Query 27023 TCACCAGCGATTTCCGCCAGCTTGCCGAAGATGACAACGCGGTGCCATTCCGTCTGCTCT 27082 ||||| |||||||| || | ||||||||||| || ||||||||||| || || |||| Sbjct 48361 TCACCCGCGATTTCGGCGATCTTGCCGAAGAACACTACGCGGTGCCACTCGGTACGCTCC 48302 Query 27083 TTTGGTTCGCCTGTGGCCTTATCTTTCCACTTTTCGGTTGTGGCAATGCTGAGATTGGCA 27142 | | | ||| || |||||||||||| ||||| | ||||| | | | | || | Sbjct 48301 TGCTGCTGGCCGGTCTGCTTATCTTTCCAGCTTTCGCTGGTGGCCAGGGTTATGTTCGTT 48242 Query 27143 ACTGCGCCACCTGACGGCATGTAGCGCACTTCTGGATCG 27181 || ||| || ||| ||||||| ||||| || ||| Sbjct 48241 ACGGCGTTGCCGTTCGGGGTGTAGCGGACTTCCGGGTCG 48203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134005983476640