Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq331 129 1e-24
>seq331
Length=323222
Score = 129 bits (142), Expect = 1e-24
Identities = 160/218 (73%), Gaps = 6/218 (3%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|||||||| || || || ||||| || ||||||||||| |||| | || | ||||||
Sbjct 7717 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 7776
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||| ||||| |||||||||||||| | | || |||||||| ||
Sbjct 7777 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCC 7836
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || ||||| |||| | | |||| ||| ||| || ||||| || ||
Sbjct 7837 TGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCGACCTCAAGGGTGATG 7893
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| ||||| ||||| |||||||| |||| |||||| ||
Sbjct 7894 GTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATGTT 7931
Score = 107 bits (118), Expect = 4e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|||||||| || || || ||||| || |||||||| || |||| | || | ||||||
Sbjct 7489 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGGGTGCGGCCATCT 7548
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| |||||||||||||| | | || |||||||| ||
Sbjct 7549 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCC 7608
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || ||||| |||| | | |||| ||| || || || || || ||
Sbjct 7609 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTC 7668
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| ||||| ||||| || |||| ||||||
Sbjct 7669 TTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 7700
Score = 98.7 bits (108), Expect = 2e-15
Identities = 142/199 (71%), Gaps = 6/199 (3%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|||||||| || || || ||||| || ||||| ||||| |||| | || | ||||||
Sbjct 11292 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCT 11351
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||| ||||| |||||||||||||| | | || |||||||| ||
Sbjct 11352 TCCAGTTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 11411
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || |||||| |||| | |||| ||| ||| || ||||| || ||
Sbjct 11412 TGGATCTTGGCCTTGACATTCTCAATAGTGTC---ACTTGGCTCAACCTCAAGGGTGATG 11468
Query 152070 GTTTTGCCCGTGAGAGTCT 152088
|| ||||| || || ||||
Sbjct 11469 GTCTTGCCGGTCAGGGTCT 11487
Score = 95.1 bits (104), Expect = 3e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 151926 TTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGC 151985
||||| |||| | || | |||||||| || || ||||| ||||| |||||||||
Sbjct 12929 TTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGC 12988
Query 151986 TGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCT 152045
||||| | | || |||||||| || |||||||| || ||| |||| | | ||||
Sbjct 12989 TGGTCAGGGGGAATGCCTTCCTTGTCCTGAATTTTAGCCTTCACATTCTCAATGGTGTCG 13048
Query 152046 GAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
||| || ||||| || || || ||||| ||||| ||||| || || | ||||||
Sbjct 13049 CTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAAATCTGCATG 13108
Query 152106 TT 152107
||
Sbjct 13109 TT 13110
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153727753727274
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |