Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq331 129 1e-24
seq822 93.3 9e-14
seq4 93.3 9e-14
seq1541 89.7 1e-12
seq77 87.8 4e-12
>seq331
Length=323222
Score = 129 bits (142), Expect = 1e-24
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| || | ||| || || || || || | ||| || || |||||||||||||| |
Sbjct 7701 ACCGCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 7760
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||||||||| || || || || ||||||||||||| | || ||||| ||
Sbjct 7761 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGG 7820
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || ||||| || |||||||| || || ||| | || || ||||| | |||||
Sbjct 7821 AATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGAC 7880
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || ||||| ||||| || || | ||||| || || |||||||| ||
Sbjct 7881 CTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATGTT 7931
Score = 116 bits (128), Expect = 8e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| || | ||| || || || || || | ||| || || ||||| |||||||| |
Sbjct 11276 ACCGCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGA 11335
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||||||||| || ||||| || ||||||||||||| | || |||||| ||
Sbjct 11336 GAGGGTGCGGCCATCTTCCAGTTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGG 11395
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || ||||| || |||||||| || || || | || |||||||| | || ||
Sbjct 11396 AATGCCTTCCTTATCCTGGATCTTGGCCTTGACATTCTCAATAGTGTCACTTGGCTCAAC 11455
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCT 283083
|| || ||||| ||||| || |||| ||||
Sbjct 11456 CTCAAGGGTGATGGTCTTGCCGGTCAGGGTCT 11487
Score = 114 bits (126), Expect = 3e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| || | ||| || || || || || | ||| || || |||||||| ||||| |
Sbjct 7473 ACCGCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGA 7532
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||||||||| || || || || || |||||||||| | || ||||| ||
Sbjct 7533 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGG 7592
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || ||||| || |||||||| || || ||| | || || ||||| | || ||
Sbjct 7593 AATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAAC 7652
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| || || | ||||| || || ||||||||
Sbjct 7653 CTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 7700
Score = 107 bits (118), Expect = 4e-18
Identities = 133/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 282921 TTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGT 282980
|||||||| | || ||||||||||| || || || || ||||||||||||| | ||
Sbjct 12929 TTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGC 12988
Query 282981 TGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCC 283040
|||||| ||||| || |||||||| || || || || || || | || || |||||
Sbjct 12989 TGGTCAGGGGGAATGCCTTCCTTGTCCTGAATTTTAGCCTTCACATTCTCAATGGTGTCG 13048
Query 283041 GAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
| ||||| || || ||||| ||||| || || | ||||| || || ||||||||
Sbjct 13049 CTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAAATCTGCATG 13108
Query 283101 TT 283102
||
Sbjct 13109 TT 13110
>seq822
Length=122784
Score = 93.3 bits (102), Expect = 9e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 67687 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 67745
Score = 93.3 bits (102), Expect = 9e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 68670 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 68728
>seq4
Length=8983680
Score = 93.3 bits (102), Expect = 9e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 4200165 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 4200107
>seq1541
Length=45169
Score = 89.7 bits (98), Expect = 1e-12
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 26514 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 26456
>seq77
Length=1416746
Score = 87.8 bits (96), Expect = 4e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 282995 ACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTC 283054
||| |||||||| || |||||||| || || | ||||||||||| | || || ||
Sbjct 1353184 ACCTTCCTTGTCCTGAATCTTTGCCTTGACATTTTCGATAGTGTCGCTGGGCTCAACCTC 1353243
Query 283055 GAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| ||||| ||||| |||||||| ||||| ||||| |||||||| ||
Sbjct 1353244 AAGGGTGATGGTCTTCCCCGTCAATGTCTTCACGAAGATCTGCATGTT 1353291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046654788988276
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |