Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq331 136 1e-26
>seq331
Length=323222
Score = 136 bits (150), Expect = 1e-26
Identities = 156/208 (75%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || ||||| || ||||| || || || |||||||| ||||| || || |||
Sbjct 7925 CAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGA--GCCCAGTG 7868
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||||||||| ||||| ||||| || ||||| || || || |||||||
Sbjct 7867 ACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCCGACCAGC 7808
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | || ||||| ||||| || ||||| |||||||| | || || |||| || |||
Sbjct 7807 AGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAACA 7748
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || || || || || || |||||
Sbjct 7747 TCCAGAAGGAGTCCACCCTCCACCTTGT 7720
Score = 131 bits (144), Expect = 4e-25
Identities = 155/208 (75%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || || || || ||||| || || || |||||||| ||||| || || |||
Sbjct 7697 CAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGA--GCCCAGCG 7640
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||||||||| ||||| ||||| || ||||| || || || |||||||
Sbjct 7639 ACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCCGACCAGC 7580
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | || ||||| || || || ||||| |||||||| | || || |||| ||||||
Sbjct 7579 AGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTATAACA 7520
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || || || || || || |||||
Sbjct 7519 TCCAGAAGGAGTCCACCCTCCACCTTGT 7492
Score = 113 bits (124), Expect = 1e-19
Identities = 133/178 (75%), Gaps = 4/178 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| ||||| || || || ||||| || || || |||||||| ||||| || || |||
Sbjct 13104 CAGATTTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGA--GCCCAGCG 13047
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||| || || || ||||||||||| ||||| || || || |||||||
Sbjct 13046 ACACCATTGAGAATGTGAAGGCTAAAATTCAGGACAAGGAAGGCATTCCCCCTGACCAGC 12987
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAA 178099
| | || ||||| ||||| || ||||| |||||||| | || || |||| || ||
Sbjct 12986 AGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAA 12929
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203634128859036
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |