Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq31 210 2e-49 >seq31 Length=8019404 Score = 210 bits (232), Expect = 2e-49 Identities = 290/403 (72%), Gaps = 6/403 (1%) Strand=Plus/Plus Query 107687 CCCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAA 107746 ||| || ||| ||| ||| |||||||||||| || ||||| |||||| |||||||| | Sbjct 4771354 CCCTCTCAGTGTAGAGGAGAGAGACTTCCCCATCGCTTACTCCATGGTGATCCATGAGCA 4771413 Query 107747 GATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGT 107806 ||| || | ||||| || || ||||| || | || || || ||||| || ||||| || Sbjct 4771414 GATCGAGATGTTTGAGCGACTCCTGCGCTCCATTTACGCGCCCCAGAATATCTACTGCGT 4771473 Query 107807 CCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTG 107866 ||| ||||| |||||| || ||||| | ||| || |||| || | ||||| Sbjct 4771474 GCACCTGGATAAAAAGTCCAATGAAGAGTTCAAGGCGGCTGTGGAGGCGATCGTCTCCTG 4771533 Query 107867 CTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAG 107926 ||| || || || ||||| |||| | || | ||||| || ||||| |||||| | Sbjct 4771534 CTTTCCTAACGTGTTCATAGCCACCAGATTAGAAAGTGTGGTGTACGCCTCGTGGTCCCG 4771593 Query 107927 AGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCT--CAG-TGCCATGGAA 107983 ||||| || || ||||||||||| |||| |||| || || ||| | |||| Sbjct 4771594 GGTGCAGGCAGATTTGAACTGTATGAAAGATCTGCT---GAACTCGCAGATTAAGTGGAG 4771650 Query 107984 GTACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCT 108043 |||||| || || || |||||||| ||||||||||| |||||||| |||||||||| Sbjct 4771651 GTACTTGCTAAACACCTGCGGGACCGACTTCCCCATCAAGACCAACAGAGAGATGGTCCA 4771710 Query 108044 GGCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAG 108086 ||| || ||| | | ||| ||||||| |||||| | ||| Sbjct 4771711 GGCGCTGAAGGCCCTCAGGGGCCAGAACAGCATGGAGACCGAG 4771753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348245234391648