Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 1e-12 >seq2 Length=17630497 Score = 89.7 bits (98), Expect = 1e-12 Identities = 243/368 (66%), Gaps = 7/368 (2%) Strand=Plus/Plus Query 249043 TGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAG 249102 ||||| || || |||||| |||||||| |||| || ||||| || || || || ||| Sbjct 6621392 TGCTTCCTGCTCGCCATGAAAGACGACAGCATCGAGGGGATTTACGATACACTGAAGCAG 6621451 Query 249103 ACGGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCG 249162 || || || || | || || |||||||| | | ||| | ||||||| | Sbjct 6621452 TGCGCCCTCATCTCCAAGTCGGCCGGAGGAATCGGCGTGGCAGTCAGCTGCATCCGATCA 6621511 Query 249163 A-AGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCG 249221 | |||| | |||||| || || || || | ||||| | || ||| | || | Sbjct 6621512 ACAGGGAGC-TACATCGCCGGCACCAACGGCAACTCCAATGGTCTAGTCCCCATGCTGAG 6621570 Query 249222 ATGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGGGCGCCGAAAGG----GGTCGT 249277 | | | ||| || ||| | || |||||| ||| | | | ||| | | | Sbjct 6621571 AGTGTACAACAACACGGCGCGGTACGTCGACCAGGGCGG-CAACAAGAGGCCCGGAGCTT 6621629 Query 249278 TCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGA 249337 |||||||||| ||||| |||||| ||| | || || |||||||| |||| || | Sbjct 6621630 TCGCCATGTACTTGGAGCCCTGGCACTTTGATGTGTTTGACTTCCTGGAGCTGAAGAAAA 6621689 Query 249338 ACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACT 249397 ||| || || ||| ||| || | ||||||||||||| ||||||| || ||||| Sbjct 6621690 ACACAGGAAAGGAGGAGCAGAGGGCCAGAGACCTCTTCTACGCCCTGTGGATCCCCGACC 6621749 Query 249398 TGTTCATG 249405 |||||||| Sbjct 6621750 TGTTCATG 6621757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073690017627136