Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 6e-12 seq390 84.2 2e-11 seq73 84.2 2e-11 >seq2 Length=17630497 Score = 86.0 bits (94), Expect = 6e-12 Identities = 328/515 (64%), Gaps = 0/515 (0%) Strand=Plus/Minus Query 37123 AGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTA 37182 || || ||||| || | ||| || ||||| || | || || | || || || ||||| Sbjct 6622662 AGATGGGGATTCACTATCTGGAACTCTCCGGAGAGGACCCTGCGGGTGTAGATGTTGCTG 6622603 Query 37183 GTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATT 37242 || || | |||||||||||| || || | | || || | || || || || ||||| Sbjct 6622602 GTGTAGGCTTCAATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCGGTGGGCATC 6622543 Query 37243 GGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTC 37302 || || | || || || || |||| || || | || | | || || ||| Sbjct 6622542 GGGGCCAGCAGCAGACTGTTCCTCACCCCGTGCTTGGCGATCTTTTCCTTGAGCAGCTTC 6622483 Query 37303 CAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTC 37362 || ||||| | | || || |||| |||||| || || || || || || || || Sbjct 6622482 CAGTCCCACAGCTTGGTGGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTGCTG 6622423 Query 37363 GCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGAT 37422 | || || | | |||||||| || || ||| || || ||||| || Sbjct 6622422 ACGGGGGAGCCTTCGTATGTCTCGTAGGGGCCGAGCTCGGCGGCCAGCTCGCAGCTGCCC 6622363 Query 37423 TCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCG 37482 || || |||||||| || || || || || ||||| || || | | | || || | Sbjct 6622362 TCCAGGGCGGCATAGTAGATGGTCTCAAAGATTTGAATGTTCAGCAGCTGCGCCTCAGGG 6622303 Query 37483 CTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCT 37542 || |||||||| | | || | || || || |||||||| || |||||||| ||| Sbjct 6622302 CTTTCGAATGCGTGACGCATGAGGATGAAGGTGTCTGCCAAACCTTGGACACCGATTCCT 6622243 Query 37543 ATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCT 37602 || || | || ||| || || | | || |||||| || | || |||||| Sbjct 6622242 ATTGGCCGGTGACGCTTGTTGGACTTCTCTGCCTCAGGCACTGGGTAGAAGTTAATATCT 6622183 Query 37603 ATTATTTTATTTAGATTTTTAACTAGTATTTTCGT 37637 || || || || | |||||| || | || ||| || Sbjct 6622182 ATGATCTTGTTCAAATTTTTGACAATTACTTTGGT 6622148 >seq390 Length=2268 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || ||||| || || || || || || || || | |||||||||| |||| || || Sbjct 2042 TCATCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCTTC 1983 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | ||| || || ||||| || |||||||| ||||| ||||||||||| || || || || Sbjct 1982 AGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGGCGGCGAACGCC 1923 Query 11774 ACTACTCTTTCTCC 11787 || || | ||||| Sbjct 1922 ACCACGCGCTCTCC 1909 >seq73 Length=1910340 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || ||||| || || || || || || || || | |||||||||| |||| || || Sbjct 1745252 TCATCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCTTC 1745311 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | ||| || || ||||| || |||||||| ||||| ||||||||||| || || || || Sbjct 1745312 AGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGGCGGCGAACGCC 1745371 Query 11774 ACTACTCTTTCTCC 11787 || || | ||||| Sbjct 1745372 ACCACGCGCTCTCC 1745385 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || ||||| || || || || || || || || | |||||||||| |||| || || Sbjct 1749144 TCATCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCTTC 1749203 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | ||| || || ||||| || |||||||| ||||| ||||||||||| || || || || Sbjct 1749204 AGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGGCGGCGAACGCC 1749263 Query 11774 ACTACTCTTTCTCC 11787 || || | ||||| Sbjct 1749264 ACCACGCGCTCTCC 1749277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468492284378880