Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 3e-15 seq37 93.3 4e-14 seq6 84.2 2e-11 >seq3 Length=24902066 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608 |||||| || | |||| || || |||||||| ||||| ||||| | |||| Sbjct 14702562 ACGCAAGACAAGATGAAGGGTGGATTCTTTTTGGATGTTGTAATCAGAGAGGGTGCGGCC 14702621 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||||| ||||| || || ||| ||||||| | ||||| || ||||| ||||||||||| Sbjct 14702622 ATCTTCAAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTT 14702681 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || || | | || | ||||| ||| ||| ||||||| ||| | Sbjct 14702682 GTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCACTGGCCTCAACCTCAAGGGTAAT 14702741 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || ||||| || | || || ||||| || ||||| Sbjct 14702742 GGTTTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 14702777 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| | | ||||| || | || | || |||||||| || ||||| || || Sbjct 14702778 GCCGCCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGA 14702837 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| ||||| ||||| || || ||| ||||||| | ||||| || || || Sbjct 14702838 GAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGG 14702897 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 |||||||||||||| ||| || || | | || | ||||| |||| || || Sbjct 14702898 AATGCCTTCTTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCACTGGGTTCAAC 14702957 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| ||| | || ||||| || | ||||| || || || ||||| Sbjct 14702958 CTCAAGGGTGATGGTTTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 14703005 >seq37 Length=6129110 Score = 93.3 bits (102), Expect = 4e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 |||||||||| | ||||||| |||||||||||| |||||| ||||| |||||||| || Sbjct 1723419 TCTTCGAGCTACTCACCAGCAAAGATCAGACGTTACTGATCAGGAGGGATGCCTTCCTTA 1723360 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || |||| || | | | ||| | ||||| | | |||||| |||| ||| | Sbjct 1723359 TCTTTGATCTTGGCCTCCAAATTTTCAATGGTGTCACTTGCCTCCACTTCAAGGGTAATG 1723300 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 ||||||| |||| || || || || || |||||| || Sbjct 1723299 GTCTTGCTAGTCAGGGTCTTCACAAAGATCTGCATACCT 1723261 >seq6 Length=17716291 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| ||||| || || ||| |||||||||| ||||| || | || ||||| || || Sbjct 10619676 TCTTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTAGGGGGATGCCCTCCTTA 10619735 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | || ||| | ||||||||||| | ||| | Sbjct 10619736 TCCTGGATCTTGGCCTTCACGTTCTCAATGGTCTCGCTTGGCTCCACCTCCAGGGTGATG 10619795 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||||||| |||| ||| || ||||| || |||||| Sbjct 10619796 GTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCATA 10619831 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| ||||| || || ||| |||||||||| ||||| || | || ||||| || || Sbjct 10619904 TCTTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTAGGGGGATGCCCTCCTTA 10619963 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | || ||| | ||||||||||| | ||| | Sbjct 10619964 TCCTGGATCTTGGCCTTCACGTTCTCAATGGTCTCGCTTGGCTCCACCTCCAGGGTGATG 10620023 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||||||| |||| ||| || ||||| || |||||| Sbjct 10620024 GTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCATA 10620059 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| ||||| || || ||| |||||||||| ||||| || | || ||||| || || Sbjct 10620132 TCTTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTAGGGGGATGCCCTCCTTA 10620191 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | || ||| | ||||||||||| | ||| | Sbjct 10620192 TCCTGGATCTTGGCCTTCACGTTCTCAATGGTCTCGCTTGGCTCCACCTCCAGGGTGATG 10620251 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||||||| |||| ||| || ||||| || |||||| Sbjct 10620252 GTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCATA 10620287 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| ||||| || || ||| |||||||||| ||||| || | || ||||| || || Sbjct 10620360 TCTTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTAGGGGGATGCCCTCCTTA 10620419 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | || ||| | ||||||||||| | ||| | Sbjct 10620420 TCCTGGATCTTGGCCTTCACGTTCTCAATGGTCTCGCTTGGCTCCACCTCCAGGGTGATG 10620479 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||||||| |||| ||| || ||||| || |||||| Sbjct 10620480 GTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCATA 10620515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496029573158400