Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq3 111 2e-19 >seq3 Length=24902066 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 142969 ACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGA 143028 |||||| || | ||||| || ||||||||||| ||||||||||| | |||| Sbjct 14702334 ACGCAAGACAAGATGAAGGGTGGATTCTTTTTGGATGTTGTAATCAGAGAGGGTGCGGCC 14702393 Query 143029 GTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 143088 ||||| || || || || ||| ||||||| | ||||| || || || |||||||| || Sbjct 14702394 ATCTTCAAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTT 14702453 Query 143089 GTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCAC 143148 ||| || || || | | ||||| ||||| |||| ||||| |||| ||| | Sbjct 14702454 GTCCTGGATCTTGGTCTTCACGTTCTCCACAGTGTCGCTGGGCTCTACCTCAAGAGTGAT 14702513 Query 143149 CGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||||||| || | || || ||||| |||||||| Sbjct 14702514 GGTCTTGCCTGTGAGGGTCTTGACGAAAATTTGCAT 14702549 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 142969 ACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGA 143028 |||||| || | ||||| || ||||||||||| ||||||||||| | |||| Sbjct 14702562 ACGCAAGACAAGATGAAGGGTGGATTCTTTTTGGATGTTGTAATCAGAGAGGGTGCGGCC 14702621 Query 143029 GTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 143088 ||||| || || || || ||| ||||||| | ||||| || ||||| ||||||||||| Sbjct 14702622 ATCTTCAAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTT 14702681 Query 143089 GTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCAC 143148 ||| || || || | | || | ||||| ||| || || |||| || | Sbjct 14702682 GTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCACTGGCCTCAACCTCAAGGGTAAT 14702741 Query 143149 CGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || ||||| || | || || ||||| || ||||| Sbjct 14702742 GGTTTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 14702777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506979213200640