Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 7e-16 >seq3 Length=24902066 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||| || |||| | || || | |||||||||||| |||||||| ||||||||||| Sbjct 14702549 TGCCCCCCCTCAGACGCAAGACAAGATGAAGGGTGGATTCTTTTTGGATGTTGTAATCAG 14702608 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 || | | | ||||| | || || || || | |||| | || ||||| | Sbjct 14702609 AGAGGGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGAG 14702668 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 |||| ||||||||||| || ||| ||| ||| | || ||||| || || || | Sbjct 14702669 GAATGCCTTCTTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCACTGGCCTCAA 14702728 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 | || | |||||||||||| ||||| || || || || || || ||||| Sbjct 14702729 CCTCAAGGGTAATGGTTTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 14702777 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||| || |||| | || || | |||||||||||| |||||||| ||||||||||| Sbjct 14702321 TGCCCCCCCTCAGACGCAAGACAAGATGAAGGGTGGATTCTTTTTGGATGTTGTAATCAG 14702380 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 || | | | ||||| | || || || || | |||| | || ||||| | Sbjct 14702381 AGAGGGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGG 14702440 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 |||| ||||| ||||| || ||| |||| || | || | || ||||| |||| Sbjct 14702441 GAATGCCTTCCTTGTCCTGGATCTTGGTCTTCACGTTCTCCACAGTGTCGCTGGGCTCTA 14702500 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 | || | || ||||| || ||||| || || || || ||||||||||| Sbjct 14702501 CCTCAAGAGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAAATTTGCAT 14702549 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| |||||||| ||||| || |||||||| || || | | | ||||| | || Sbjct 14702802 ATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCAAGCTG 14702861 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||||| || | |||| | || ||||| ||||| ||||||||||| || || Sbjct 14702862 CTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGGATCTT 14702921 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 | ||| ||| | || ||||| || || ||| || || | ||| |||||||| || || Sbjct 14702922 GGCCTTCACATTGTCAATGGTGTCACTGGGTTCAACCTCAAGGGTGATGGTTTTGCCAGT 14702981 Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363 || ||||| ||||| || ||||| Sbjct 14702982 GAGGGTTTTGACAAAGATCTGCAT 14703005 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| |||||||| ||||| || ||||| || ||| || ||| | || |||| || Sbjct 14702002 ATGGAGGGTGGATTCTTTCTGGATGTTATAGTCGGAGAGGGTTCGGCCATCCTCTAGCTG 14702061 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||||||||| | |||| | || || || || || ||||| ||||| || || Sbjct 14702062 TTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGAGGGATGCCTTCCTTGTCCTGGATCTT 14702121 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 | ||| ||| |||| | || || ||| || || || | ||| ||||| || || || Sbjct 14702122 GGCCTTCACATTTTCAACTGTGTCACTAGCCTCAACCTCCAGGGTGATGGTCTTGCCAGT 14702181 Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363 ||| || || ||||| |||||||| Sbjct 14702182 CAGGGTCTTGACAAAGATTTGCAT 14702205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362154693144432