Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq699 122 6e-23 >seq699 Length=1473 Score = 122 bits (134), Expect = 6e-23 Identities = 116/147 (79%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || |||||||| |||||||| ||||||||||| || || ||||| |||| ||||| Sbjct 329 GCGATCATGTAGGTGAGGAGTGCATAGCTGGCGATATTGAAAGGTACTCCGAGGCCCATA 388 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 | | ||||||| |||||| |||||||| || ||||| |||| |||||||| |||||||| Sbjct 389 T-CGCCCGACCGCTGGTACAGCTGACATGACAGCTCGCCGTCACTCACGTAGAACTGACA 447 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTAT 25652 || || || || || || ||||| || Sbjct 448 CAGGGCGTGACAGGGCGGCAGAGCCAT 474 Score = 105 bits (116), Expect = 5e-18 Identities = 124/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||||| | ||| || || ||||| | |||||||||||| || ||||| ||||| ||||| Sbjct 1279 CATGTTTGCGTAGTCGGCACCGAAGTGCCTCCACTGGAAACCATACACAGGTCCCAGGTC 1338 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892 || || || |||| | ||||| || |||| || || | || ||||| || || Sbjct 1339 CCCTTCCTCTCTGTCTTTGAAGCCAAGGTTGTCCAGGAACTCCCGTGACCCATTTGCTTC 1398 Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 ||| ||||| ||||| ||||| | |||||| |||| ||||| || || Sbjct 1399 CCAAATCTTCACCCCTTTCTCTGTGAGCTCCTTGGCATTTGTTGATCC 1446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340114584589296