Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq52 91.5 8e-14 seq9 89.7 3e-13 seq66 86.0 3e-12 seq30 84.2 1e-11 seq7 84.2 1e-11 seq98 82.4 4e-11 seq75 82.4 4e-11 seq54 82.4 4e-11 seq37 82.4 4e-11 seq3 82.4 4e-11 >seq52 Length=8204060 Score = 91.5 bits (100), Expect = 8e-14 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||| | || |||||| | |||||||||| ||||||| ||||||||||||| ||| Sbjct 1938668 AAAACTTTAACTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACG 1938727 Query 11505 CTCTRACCAACTGAGCTAATGGGCCGTCGACG 11536 |||| |||||||||||||| |||||| |||| Sbjct 1938728 CTCTAACCAACTGAGCTAACCGGCCGTGGACG 1938759 >seq9 Length=8479312 Score = 89.7 bits (98), Expect = 3e-13 Identities = 73/88 (83%), Gaps = 1/88 (1%) Strand=Plus/Plus Query 11445 AAAAATCAA-ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| | | |||||| | |||||||||| ||||||| ||||||||||||| || Sbjct 4045643 AAAAATCTACAGTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCAC 4045702 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCGT 11531 ||||| |||||||||||||| |||||| Sbjct 4045703 GCTCTAACCAACTGAGCTAACCGGCCGT 4045730 >seq66 Length=1981418 Score = 86.0 bits (94), Expect = 3e-12 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513 |||||||| | |||||||||| ||||||| ||||||||||||| ||||||| |||| Sbjct 267128 ATTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCA 267069 Query 11514 ACTGAGCTAATGGGCC 11529 |||||||||| |||| Sbjct 267068 ACTGAGCTAACCGGCC 267053 >seq30 Length=5066303 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||| | |||||||||| ||||||| ||||||||||||| ||||||| ||||| Sbjct 1889934 TTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 1889875 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 1889874 CTGAGCTAACCGGCC 1889860 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||| | |||||||||| ||||||| ||||||||||||| ||||||| ||||| Sbjct 1890387 TTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 1890328 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 1890327 CTGAGCTAACCGGCC 1890313 >seq7 Length=21537844 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||| | |||||||||| ||||||| ||||||||||||| ||||||| ||||| Sbjct 2741934 TTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 2741993 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 2741994 CTGAGCTAACCGGCC 2742008 >seq98 Length=799208 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 23562 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 23503 Query 11528 CC 11529 || Sbjct 23502 CC 23501 >seq75 Length=1614987 Score = 82.4 bits (90), Expect = 4e-11 Identities = 62/74 (84%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||| |||| ||||| ||||||| ||||||||||||| ||||||| |||||| Sbjct 24670 TGGCCCATATGGGGATTGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAAC 24611 Query 11516 TGAGCTAATGGGCC 11529 |||||||| |||| Sbjct 24610 TGAGCTAACCGGCC 24597 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 279402 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 279461 Query 11528 CC 11529 || Sbjct 279462 CC 279463 >seq54 Length=3004767 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 1341233 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 1341174 Query 11528 CC 11529 || Sbjct 1341173 CC 1341172 >seq37 Length=6129110 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 4696349 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 4696408 Query 11528 CC 11529 || Sbjct 4696409 CC 4696410 >seq3 Length=24902066 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 18471620 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 18471679 Query 11528 CC 11529 || Sbjct 18471680 CC 18471681 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261473506197952