Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq3 104 2e-17 seq33 95.1 1e-14 seq51 87.8 2e-12 >seq3 Length=24902066 Score = 104 bits (114), Expect = 2e-17 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | || || ||||| ||||| ||||| || ||||| || || Sbjct 14701233 GACACCATTGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAG 14701174 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||||| || | | ||||| || || || |||| | | | | || |||||||||| Sbjct 14701173 CAGAGACTGATCTTTGCTGGCAAGCAGCTGGAGGATGGTCGCACCCTCTCCGACTATAAC 14701114 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || |||||||| || |||||||||||||| | ||||||||||| Sbjct 14701113 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTTAGAGGAGG 14701067 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || | ||||| || | |||||| | || | || | | Sbjct 14701749 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAGACCATCACCCTAGAGGTTGAGGCCAGT 14701690 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| | ||| | || ||| ||||| ||||| ||||| || ||||| ||||| Sbjct 14701689 GACACTGTTGAGAATGTGAAAACCAAGATCCAGGACAAGGAAGGCATCCCTCCTGATCAG 14701630 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || || | | |||||||| || || |||| ||| | || |||||||||| Sbjct 14701629 CAGAGGCTGATCTTTGCTGGCAAACAGCTAGAGGATGGCCGAACCCTCTCCGACTATAAC 14701570 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || |||||||| || |||||||||||||| | || || || || Sbjct 14701569 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTGAGGGGCGG 14701523 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || | ||||| || | |||||| | || | || | | Sbjct 14701977 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAGACCATCACCCTAGAGGTTGAGGCCAGT 14701918 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| | ||| | || ||| ||||| ||||| ||||| || ||||| ||||| Sbjct 14701917 GACACTGTTGAGAATGTGAAAACCAAGATCCAGGACAAGGAAGGCATCCCTCCTGATCAG 14701858 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || || | | |||||||| || || |||| ||| | || |||||||||| Sbjct 14701857 CAGAGGCTGATCTTTGCTGGCAAACAGCTAGAGGATGGCCGAACCCTCTCCGACTATAAC 14701798 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || |||||||| || |||||||||||||| | || || || || Sbjct 14701797 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTGAGGGGCGG 14701751 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | ||||| || | |||||| | || | || | | Sbjct 14702205 ATGCAAATCTTTGTCAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTTGAGGCTAGT 14702146 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| | || | || || ||||| ||||| ||||| || ||||| ||||| Sbjct 14702145 GACACAGTTGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCTGATCAG 14702086 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || || | | |||||||| || || |||| ||| | || |||||||||| Sbjct 14702085 CAGAGGCTGATCTTTGCTGGCAAACAGCTAGAGGATGGCCGAACCCTCTCCGACTATAAC 14702026 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || |||||||| || |||||||||||||| | || || || || Sbjct 14702025 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTGAGGGGCGG 14701979 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| ||||| | ||||| ||| | |||||| | || | ||| | | Sbjct 14703005 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAAACCATCACCCTTGAGGTTGAACCCAGT 14702946 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | || || ||||| ||||||||||| || || || || || Sbjct 14702945 GACACCATTGACAATGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 14702886 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || || | | |||||| || || ||||||| | | | || ||||| ||| Sbjct 14702885 CAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCTGACTACAAC 14702826 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || ||||| || || ||||||| |||||| | || || || || Sbjct 14702825 ATCCAGAAAGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGGGGCGG 14702779 >seq33 Length=5647056 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | ||||| || | |||||| | || | ||| | | | Sbjct 11795 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTTGAACCCAGC 11854 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| ||| | || || ||||| ||||| || || || || || ||||| Sbjct 11855 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGATCAG 11914 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || || | | ||||| || || ||||||| | | | | || ||||||||| Sbjct 11915 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCTGACTATAAC 11974 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || |||||||| || ||||||| |||||| | || || || || Sbjct 11975 ATCCAGAAAGAATCCACCCTCCATCTTGTCCTGCGTCTGAGGGGCGG 12021 >seq51 Length=6925267 Score = 87.8 bits (96), Expect = 2e-12 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 71716 TGAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGAC 71775 |||||| || || || || | | | || ||||||||||||||||||||||| |||||||| Sbjct 6812708 TGAGGGGAAGATGCATGGTTTCTTGCGGATGTACTGGGCCAAAAAGATTCTGGAGTGGAC 6812649 Query 71776 TCAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGA 71835 || |||||||| |||||||| || | || || |||||| | || || || Sbjct 6812648 TCCCTCTCCCGAGGAGGCGCTCTCCACAGCTCTGTACCTGAACGATCGCTATGAGCTGGA 6812589 Query 71836 CGGTCGCGATCCTAACGGTTATGTCGGT 71863 || | || |||||||| | ||| ||| Sbjct 6812588 TGGACAGGACCCTAACGGCTTTGTGGGT 6812561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478629180829440