Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2 163 7e-35 >seq2 Length=17630497 Score = 163 bits (180), Expect = 7e-35 Identities = 456/693 (66%), Gaps = 14/693 (2%) Strand=Plus/Plus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||| ||||| ||||||||| || | || ||||| ||| | || || || || ||| Sbjct 6621407 ATGAAAGACGACAGCATCGAGGGGATTTACGATACACTGAAGCAGTGCGCCCTCATCTCC 6621466 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA-CAGAACAGTTACAT 363740 ||| || || ||||| || || | || | | || || ||| || ||||| Sbjct 6621467 AAGTCGGCCGGAGGAATCGGCGTGGCAGTCAGCTGCATCCGATCAACAGGG-AGCTACAT 6621525 Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 |||||| || |||| ||||| || || |||||||| | |||| |||| || Sbjct 6621526 CGCCGGCACCAACGGCAACTCCAATGGTCTAGTCCCCATGCTGAGAGTGTACAACAACAC 6621585 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGA 363860 ||| |||||||||||||||| || ||| | || || || || ||||| | || Sbjct 6621586 GGCGCGGTACGTCGACCAGGGCGGCAACAAGAGGCCCGGAGCTTTCGCCATGTACTTGGA 6621645 Query 363861 GCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGA 363920 ||| || ||| | ||||| || || ||||| ||||||||| ||||| ||||| Sbjct 6621646 GCCCTGGCACTTTGATGTGTTTGACTTCCTGGAGCTGAAGAAAAACACAGGAAAGGAGGA 6621705 Query 363921 ATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT 363980 | | || | || || ||||| || || ||| | | |||| || |||||| | || Sbjct 6621706 GCAGAGGGCCAGAGACCTCTTCTACGCCCTGTGGATCCCCGACCTGTTCATGAAGAGGGT 6621765 Query 363981 GGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGT 364040 |||| | || | ||||| || | || ||| ||||||| || || || ||| Sbjct 6621766 GGAGACCAACGAGGACTGGTCTCTGATGTGTCCAAACGAATGCCCCGGGCTGGACGAGTG 6621825 Query 364041 ATGGGGTGACGACT--ATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGT 364098 ||||| || || | | |||||| || | ||||| || ||| | | || Sbjct 6621826 CTGGGGGGAGGAGTTCGAGAAGCTCTACACCTCA--TATGA----GAAAGAAGGCCGGGT 6621879 Query 364099 -AAG---ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGAC 364154 ||| | || ||| |||| ||| |||||||| || || |||| || || Sbjct 6621880 GAAGCGTGTGGTGAAGGCTCAGCAGCTTTGGCACGCCATCATTGAGTCCCAGACGGAAAC 6621939 Query 364155 AGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCT 364214 || || || || ||| | |||||||| || |||||| | ||| |||||| ||| |||| Sbjct 6621940 TGGCACGCCATACATGCTCTACAAAGACTCCTGCAACAGGAAGAGCAACCATCAGAACCT 6621999 Query 364215 TGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGA 364274 || || || || |||||||| || || || || ||||| |||||| ||||| Sbjct 6622000 GGGCACCATCAAGAGCAGCAACCTGTGCACAGAAATCATTGAGTACACCAGCGGTGACGA 6622059 Query 364275 GACTGCCGTATGTAACCTTGCGTCGATCGCGCT 364307 | ||||| ||||| || || || ||||| || Sbjct 6622060 GGTCGCCGTCTGTAATCTGGCCTCAATCGCACT 6622092 Score = 102 bits (112), Expect = 2e-16 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 364951 CAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATT 365010 ||||||||| ||| ||||||| |||||||||| | || |||||||| |||||||| Sbjct 6623195 CAGAACATTGATGGAATTCCAGATGATCTGAAGCAGCTGTATAAAACCGTGTGGGAAATC 6623254 Query 365011 TCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAG 365070 ||| | ||| | || | ||||| || ||||| || || || ||| ||||||||| Sbjct 6623255 TCCCAGAAGACTGTTATCAAGATGGCCGCTGATCGTGGCGCCTTCATCGACCAGAGCCAG 6623314 Query 365071 TCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTAC 365130 || | ||| | ||| | |||||| || | ||| || || |||||| |||||| Sbjct 6623315 TCCATGAACATTCACATCGCCGAGCCAAACTATGGCAAACTGACCAGCATGCACTTCTAC 6623374 Query 365131 GGGTGGAAA 365139 || |||||| Sbjct 6623375 GGCTGGAAA 6623383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303260885941664