Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq3 113 4e-20 seq37 86.0 5e-12 >seq3 Length=24902066 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || || ||| | |||||| | || || ||||||| Sbjct 14702777 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAAACCATTACCCTTGAGGTTGAGGCCAGT 14702718 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | || || ||||| |||||||||||||| ||||| || || Sbjct 14702717 GACACCATTGACAATGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCTCCTGACCAG 14702658 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | | ||| ||||| || ||||||| | | | | || ||||| ||| Sbjct 14702657 CAGAGGCTGATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACCCTCTCTGATTACAAC 14702598 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 || ||||||||||| || ||||| | || || Sbjct 14702597 ATCCAAAAAGAATCCACCCTTCATCTTGTCTT 14702566 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | || || || | |||||| | || || ||||||| Sbjct 14701293 ATGCAGATCTTTGTCAAGACCCTCACAGGCAAGACCATTACCCTAGAGGTTGAGGCCAGT 14701234 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | || || ||||| ||||| |||||||| ||||| || || Sbjct 14701233 GACACCATTGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAG 14701174 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||||||||| | | |||||||| || || |||| | | | || ||| |||||| Sbjct 14701173 CAGAGACTGATCTTTGCTGGCAAGCAGCTGGAGGATGGTCGCACCCTCTCCGACTATAAC 14701114 Query 24171 ATTCAAAAAGAATCTAC 24187 || || |||||||| || Sbjct 14701113 ATCCAGAAAGAATCCAC 14701097 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| | ||||| ||| | || ||| | || || || ||| Sbjct 14703005 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAAACCATCACCCTTGAGGTTGAACCCAGT 14702946 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | || || ||||| |||||||||||||| || || || || Sbjct 14702945 GACACCATTGACAATGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 14702886 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | | ||||||||| || ||||||| | | | | || || || ||| Sbjct 14702885 CAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCTGACTACAAC 14702826 Query 24171 ATTCAAAAAGAATCTAC 24187 || || ||||| || || Sbjct 14702825 ATCCAGAAAGAGTCCAC 14702809 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | || || || | || || | || || ||| ||| | Sbjct 14702549 ATGCAAATTTTCGTCAAGACCCTCACAGGCAAGACCATCACTCTTGAGGTAGAGCCCAGC 14702490 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| | ||| | || || ||||| ||||| |||||||| || || || || Sbjct 14702489 GACACTGTGGAGAACGTGAAGACCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAG 14702430 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | | ||| ||||| || ||||||| | | | | || ||||| ||| Sbjct 14702429 CAGAGGCTGATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACCCTCTCTGATTACAAC 14702370 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 || ||||||||||| || ||||| | || || Sbjct 14702369 ATCCAAAAAGAATCCACCCTTCATCTTGTCTT 14702338 >seq37 Length=6129110 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || ||||||| || | || ||| | ||||| ||| | ||| Sbjct 1723037 ATGCAGATCTTCGTCAAGACCCTAACTGGCAAGACCATCACCTTGGAAGTGGAGCCAAAC 1723096 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 | |||| ||| | || || |||| | || || |||||||| || | || || Sbjct 1723097 TGCGCCATTGAGAATGTGAAGGCCCAGATCAAGGATAAGGAAGGCATCCCCTCTGACCAG 1723156 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | | |||||||||||| || |||| | | | | || || |||||| Sbjct 1723157 CAGCGTCTGATCTTTGCCGGCAAGCAACTTGAGGATGGCCGCACCCTCTCTGACTATAAC 1723216 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || || || || |||| | ||| | | |||||||||| Sbjct 1723217 ATTCAGAAGGAGTCCACCCTTCACCTCGTGCTGCGCCTGAGAGGAGG 1723263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429906908380560