Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 1e-13 >seq3 Length=24902066 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| ||||| || ||||| || || ||||| || | || ||| ||||| Sbjct 14702549 ATGCAAATTTTCGTCAAGACCCTCACAGGCAAGACCATCACTCTTGAGGTAGAGCCCAGC 14702490 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||||| |||| || || || || || || || |||||| | ||| ||| || Sbjct 14702489 GACACTG-TGGAGAACGTGAAGACCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCA 14702431 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| || || || | ||| || || || | ||||||| | ||| | | ||||| || Sbjct 14702430 GCAGAGGCTGATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACCCTCTCTGATTACAA 14702371 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 ||| |||||||| || || | ||| | || ||| Sbjct 14702370 CATCCAAAAAGAATCCACCCTTCATCTTGTCTTG 14702337 Score = 89.7 bits (98), Expect = 4e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||||||||| ||||| || |||||||| ||| | || || |||| Sbjct 14703005 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAAACCATCACCCTTGAGGTTGAACCCAGT 14702946 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| || ||||| || || || || || ||||||||| | ||| ||| || Sbjct 14702945 GACACCATT-GACAATGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCTGACCA 14702887 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| || || || | ||| ||||| || | ||||||| | ||| | | || || || Sbjct 14702886 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCTGACTACAA 14702827 Query 115465 CATTCAAAAAGAGTCTAC 115482 ||| || |||||||| || Sbjct 14702826 CATCCAGAAAGAGTCCAC 14702809 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || || ||||| || ||||| || |||||||||||| | || ||| |||| Sbjct 14702777 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAAACCATTACCCTTGAGGTTGAGGCCAGT 14702718 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| || ||||| || || || || || ||||||||| | || ||| || Sbjct 14702717 GACACCATT-GACAATGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCTCCTGACCA 14702659 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| || || || | ||| || || || | ||||||| | ||| | | ||||| || Sbjct 14702658 GCAGAGGCTGATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACCCTCTCTGATTACAA 14702599 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 ||| |||||||| || || | ||| | || ||| Sbjct 14702598 CATCCAAAAAGAATCCACCCTTCATCTTGTCTTG 14702565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425315219098240