Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq3 107 2e-18 seq33 105 6e-18 seq37 84.2 2e-11 >seq3 Length=24902066 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||| || || ||||||| | || || ||| | | Sbjct 14701521 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAGACCATCACCCTAGAGGTTGAGGCCAGT 14701462 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||| | ||| |||| || ||| ||||| ||||| |||||||||||||| Sbjct 14701461 GACACTGTTGAGAATGTGAAAACCAAGATCCAGGACAAGGAAGGCATTCCACCTGACCAG 14701402 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||| || || || | ||||||| || || | || ||||| Sbjct 14701401 CAGAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGAACCCTCTCTGACTACAAC 14701342 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||||||||| || ||| | || || | || |||||||| Sbjct 14701341 ATCCAGAAAGAATCCACCCTCCATCTTGTCCTGCGTCTCAGAGGAGG 14701295 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| | || || || ||||||| | || || ||| | Sbjct 14702549 ATGCAAATTTTCGTCAAGACCCTCACAGGCAAGACCATCACTCTTGAGGTAGAGCCCAGC 14702490 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||| | ||| ||||| || ||| ||||| ||||| ||||| |||||||| Sbjct 14702489 GACACTGTGGAGAACGTGAAGACCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAG 14702430 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || |||||||| || || | ||||||| ||||| | |||||||| Sbjct 14702429 CAGAGGCTGATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACCCTCTCTGATTACAAC 14702370 Query 25179 ATTCAAAAAGAATCCACGCTACAT 25202 || |||||||||||||| || ||| Sbjct 14702369 ATCCAAAAAGAATCCACCCTTCAT 14702346 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || ||| |||| || | || || ||| | | Sbjct 14702777 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAAACCATTACCCTTGAGGTTGAGGCCAGT 14702718 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| || ||| ||||||||||| ||||| |||||||| Sbjct 14702717 GACACCATTGACAATGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCTCCTGACCAG 14702658 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || |||||||| || || | ||||||| ||||| | |||||||| Sbjct 14702657 CAGAGGCTGATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACCCTCTCTGATTACAAC 14702598 Query 25179 ATTCAAAAAGAATCCACGCTACAT 25202 || |||||||||||||| || ||| Sbjct 14702597 ATCCAAAAAGAATCCACCCTTCAT 14702574 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054 ||| ||||| || ||||| || || | || || ||| ||||||| | || || || | Sbjct 14703009 AACCATGCAGATCTTTGTCAAAACCCTCACTGGCAAAACCATCACCCTTGAGGTTGAACC 14702950 Query 25055 GTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 |||||| || || ||||| || ||| ||||||||||| ||||| ||||| Sbjct 14702949 CAGTGACACCATTGACAATGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCTGA 14702890 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||| || | || ||||||||||| || | ||||||| ||||| | || || Sbjct 14702889 CCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCTGACTA 14702830 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| || || ||||| ||||| || ||| | || || Sbjct 14702829 CAACATCCAGAAAGAGTCCACCCTCCATCTTGTCCT 14702794 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || || |||| || | || || ||| | | Sbjct 14701293 ATGCAGATCTTTGTCAAGACCCTCACAGGCAAGACCATTACCCTAGAGGTTGAGGCCAGT 14701234 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| || ||| ||||| ||||| ||||| |||||||| Sbjct 14701233 GACACCATTGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAG 14701174 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | || ||||| ||||| || | || |||| |||||| | ||| || || Sbjct 14701173 CAGAGACTGATCTTTGCTGGCAAGCAGCTGGAGGATGGTCGCACCCTCTCCGACTATAAC 14701114 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||||||||| || ||| | || || | || |||||||| Sbjct 14701113 ATCCAGAAAGAATCCACCCTCCATCTGGTCCTGCGTCTTAGAGGAGG 14701067 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||| || || ||||||| | || || ||| | | Sbjct 14701749 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAGACCATCACCCTAGAGGTTGAGGCCAGT 14701690 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||| | ||| |||| || ||| ||||| ||||| || || ||||| || Sbjct 14701689 GACACTGTTGAGAATGTGAAAACCAAGATCCAGGACAAGGAAGGCATCCCTCCTGATCAG 14701630 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||| |||||||| |||| |||| || || | ||| || || Sbjct 14701629 CAGAGGCTGATCTTTGCTGGCAAACAGCTAGAGGATGGCCGAACCCTCTCCGACTATAAC 14701570 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || ||||||||||| || ||| | || || Sbjct 14701569 ATCCAGAAAGAATCCACCCTCCATCTGGTCCT 14701538 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||| || || ||||||| | || || ||| | | Sbjct 14701977 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAGACCATCACCCTAGAGGTTGAGGCCAGT 14701918 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||| | ||| |||| || ||| ||||| ||||| || || ||||| || Sbjct 14701917 GACACTGTTGAGAATGTGAAAACCAAGATCCAGGACAAGGAAGGCATCCCTCCTGATCAG 14701858 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||| |||||||| |||| |||| || || | ||| || || Sbjct 14701857 CAGAGGCTGATCTTTGCTGGCAAACAGCTAGAGGATGGCCGAACCCTCTCCGACTATAAC 14701798 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || ||||||||||| || ||| | || || Sbjct 14701797 ATCCAGAAAGAATCCACCCTCCATCTGGTCCT 14701766 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| |||| || || ||||||| | || || ||| | | Sbjct 14702205 ATGCAAATCTTTGTCAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTTGAGGCTAGT 14702146 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| | || ||||| || ||| ||||| ||||| || || ||||| || Sbjct 14702145 GACACAGTTGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCTGATCAG 14702086 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||| |||||||| |||| |||| || || | ||| || || Sbjct 14702085 CAGAGGCTGATCTTTGCTGGCAAACAGCTAGAGGATGGCCGAACCCTCTCCGACTATAAC 14702026 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || ||||||||||| || ||| | || || Sbjct 14702025 ATCCAGAAAGAATCCACCCTCCATCTGGTCCT 14701994 >seq33 Length=5647056 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054 ||| ||||| || ||||| ||||| |||| || || ||||||| | || || ||| | Sbjct 5981 AACTATGCAGATCTTTGTCAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTTGAGCC 6040 Query 25055 GTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 |||||| || || ||||| || ||| ||||| || || || || ||||| Sbjct 6041 CAGTGACACCATTGAAAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGA 6100 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||| || | || ||||||||||| || | ||||||| ||||| | || || Sbjct 6101 CCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTA 6160 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || || ||||||||||| || ||| | || || | || ||||| || Sbjct 6161 CAACATCCAGAAAGAATCCACCCTCCATCTTGTCCTGCGTCTGAGAGGCGG 6211 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||| || || ||||||| | || || ||| | | Sbjct 6441 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTTGAGCCCAGT 6500 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| || ||| ||||| ||||| || || |||||||| Sbjct 6501 GACACCATTGAAAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCTGACCAG 6560 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | || ||||||||||| || | ||||||| ||||| | || ||||| Sbjct 6561 CAAAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAAC 6620 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||||||||| || ||| | || || | || ||||| || Sbjct 6621 ATCCAGAAAGAATCCACCCTCCATCTTGTCCTGCGTCTGAGAGGCGG 6667 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054 ||| ||||| || ||||| ||||| |||| || || ||||||| | || || ||| | Sbjct 11563 AACCATGCAGATCTTTGTCAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCC 11622 Query 25055 GTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 |||||| || || ||||| || ||| ||||| ||||| || || ||||| Sbjct 11623 CAGTGACACCATTGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCTGA 11682 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||| || | || ||||||||||| || | ||||||| ||||| | || || Sbjct 11683 CCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTA 11742 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| || || || |||||||| || ||| | || || Sbjct 11743 CAACATCCAGAAGGAATCCACCCTCCATCTTGTCCT 11778 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||| || || ||||||| | || || ||| | | Sbjct 8041 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTTGAGCCCAGT 8100 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| || ||| ||||| || || || || |||||||| Sbjct 8101 GACACCATTGAAAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 8160 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | || |||||||||||||| | ||||||| ||||| | || ||||| Sbjct 8161 CAAAGGCTGATCTTTGCCGGCAAACAGCTGGAAGATGGCCGCACCCTCTCTGACTACAAC 8220 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 || || || |||||||| || ||| | || || | || || || || |||| Sbjct 8221 ATCCAGAAGGAATCCACCCTCCATCTTGTCCTGCGCCTGAGGGGTGGTCATTA 8273 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||| || || ||||||| | || || ||| | | Sbjct 6213 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTTGAGCCCAGT 6272 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| || ||| ||||| || || || || |||||||| Sbjct 6273 GACACCATTGAAAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 6332 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | || ||||||||||| || | ||||||| ||||| | || ||||| Sbjct 6333 CAAAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAAC 6392 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || ||||||||||| || ||| | || || Sbjct 6393 ATCCAGAAAGAATCCACCCTCCATCTTGTCCT 6424 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||| || || ||||||| | || || ||| | | Sbjct 6669 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTTGAGCCCAGT 6728 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| || ||| ||||| ||||| || || |||||||| Sbjct 6729 GACACCATTGAAAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCTGACCAG 6788 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | || ||||||||||| || | ||||||| ||||| | || ||||| Sbjct 6789 CAAAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAAC 6848 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || |||||||| || ||| | || || Sbjct 6849 ATCCAGAAGGAATCCACCCTCCATCTTGTCCT 6880 >seq37 Length=6129110 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGT-C 25057 ||||| || || || ||||| | || || || ||||||| | ||||||||| | | Sbjct 1723037 ATGCAGATCTTCGTCAAGACCCTAACTGGCAAGACCATCACCTTGGAAGTGGAGCCAAAC 1723096 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || | | || ||| ||||| | |||| || || ||||| || || ||||||| Sbjct 1723097 TG-CGCCATTGAGAATGTGAAGGCCCAGATCAAGGATAAGGAAGGCATCCCCTCTGACCA 1723155 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || ||||||||||| ||| | || |||| ||||| | || || || Sbjct 1723156 GCAGCGTCTGATCTTTGCCGGCAAGCAACTTGAGGATGGCCGCACCCTCTCTGACTATAA 1723215 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || || ||||| || || | ||||| | || |||||||| Sbjct 1723216 CATTCAGAAGGAGTCCACCCTTCACCTCGTGCTGCGCCTGAGAGGAGG 1723263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433298678860880