Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq3 111 1e-19 >seq3 Length=24902066 Score = 111 bits (122), Expect = 1e-19 Identities = 153/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 114170 CAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATC 114229 ||| || | ||| | || ||||||||||| ||||||||||| | || || ||| Sbjct 14702565 CAAGACAAGATGAAGGGTGGATTCTTTTTGGATGTTGTAATCAGAGAGGGTGCGGCCATC 14702624 Query 114230 TTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTC 114289 |||||| || || || || |||| || | ||| ||||| |||||||||||||||||||| Sbjct 14702625 TTCAAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTC 14702684 Query 114290 GGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGT 114349 ||||| || | | |||| |||||| ||| || || || | ||| | || Sbjct 14702685 CTGGATCTTGGCCTTCACATTGTCAATGGTGTCACTGGCCTCAACCTCAAGGGTAATGGT 14702744 Query 114350 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 |||||| || || || || || || ||||||||| Sbjct 14702745 TTTGCCTGTGAGGGTCTTGACGAAGATCTGCATG 14702778 Score = 107 bits (118), Expect = 2e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || ||||| | || | || || | ||| | || || ||||| || |||||||| || Sbjct 14702776 ATGCCGCCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCA 14702835 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||||||||| || || || || |||| || | ||| ||||| || Sbjct 14702836 GAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGG 14702895 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||||||||| ||||| || | | |||| |||||| ||| ||| Sbjct 14702896 GGAATGCCTTCTTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCACTGGGTTCA 14702955 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 114384 || || | ||| | |||||||| || || ||||| ||||| |||||||||| Sbjct 14702956 ACCTCAAGGGTGATGGTTTTGCCAGTGAGGGTTTTGACAAAGATCTGCATGG 14703007 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || |||||||| || |||||||| || | || || |||||| || || |||||| Sbjct 14701325 GTGGATTCTTTCTGGATGTTGTAGTCAGAGAGGGTTCGGCCATCTTCCAGCTGCTTACCA 14701384 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| ||||| || ||||||||||| ||||| ||||| ||| Sbjct 14701385 GCAAAGATCAGCCTCTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGGATCTTGGTTTTC 14701444 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||||| ||||| ||| || || || | ||| | || ||||| ||||| || Sbjct 14701445 ACATTCTCAACAGTGTCACTGGCCTCAACCTCTAGGGTGATGGTCTTGCCAGTCAGGGTC 14701504 Query 114366 TTTACAAAAATCTGCATG 114383 || ||||| ||||||||| Sbjct 14701505 TTGACAAAGATCTGCATG 14701522 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || |||||||| || ||||| || ||| | || ||| ||| || || || || ||| Sbjct 14701097 GTGGATTCTTTCTGGATGTTATAGTCGGAGAGGGTGCGACCATCCTCCAGCTGCTTGCCA 14701156 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| ||||| |||||||||||||| ||||| ||||| || Sbjct 14701157 GCAAAGATCAGTCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 14701216 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| ||| || || || | ||| | || ||||| || || || Sbjct 14701217 ACATTGTCAATGGTGTCACTGGCCTCAACCTCTAGGGTAATGGTCTTGCCTGTGAGGGTC 14701276 Query 114366 TTTACAAAAATCTGCATGGCT 114386 || ||||| ||||||||| || Sbjct 14701277 TTGACAAAGATCTGCATGCCT 14701297 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 114170 CAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATC 114229 ||| || | ||| | || ||||||||||| ||||||||||| | || || ||| Sbjct 14702337 CAAGACAAGATGAAGGGTGGATTCTTTTTGGATGTTGTAATCAGAGAGGGTGCGGCCATC 14702396 Query 114230 TTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTC 114289 |||||| || || || || |||| || | ||| ||||| || ||||||||||| ||||| Sbjct 14702397 TTCAAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTC 14702456 Query 114290 GGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGT 114349 ||||| || | | || || |||||| ||| || || || | || | || Sbjct 14702457 CTGGATCTTGGTCTTCACGTTCTCCACAGTGTCGCTGGGCTCTACCTCAAGAGTGATGGT 14702516 Query 114350 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 ||||| || || || || || ||||| |||||| Sbjct 14702517 CTTGCCTGTGAGGGTCTTGACGAAAATTTGCATG 14702550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420105971605824