Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq37 93.3 3e-14 seq104 89.7 4e-13 >seq37 Length=6129110 Score = 93.3 bits (102), Expect = 3e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 |||||||||||| |||||||| || ||||| ||| ||||||||||||||| || || | Sbjct 1723264 ACCTCCTCTCAGGCGCAGCACGAGGTGAAGGGTGGACTCCTTCTGAATGTTATAGTCAGA 1723205 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 | || | || || | ||||||||||||||| ||||| |||||||| || Sbjct 1723204 GAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCAAAGATCAGACGCTGCTGGTC 1723151 >seq104 Length=603824 Score = 89.7 bits (98), Expect = 4e-13 Identities = 75/88 (85%), Gaps = 3/88 (3%) Strand=Plus/Plus Query 114331 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGG 114387 || |||||||| ||||||||||| |||| |||||||||||||| | || |||| |||| Sbjct 225746 TGGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTTAGAGCGATCAAAGG 225805 Query 114388 AACCAAAACTGATATATTGAGCCATTCG 114415 ||||| ||||||| || ||||||||||| Sbjct 225806 AACCATAACTGATTTAATGAGCCATTCG 225833 Score = 89.7 bits (98), Expect = 4e-13 Identities = 75/88 (85%), Gaps = 3/88 (3%) Strand=Plus/Plus Query 115528 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGG 115584 || |||||||| ||||||||||| |||| |||||||||||||| | || |||| |||| Sbjct 225746 TGGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTTAGAGCGATCAAAGG 225805 Query 115585 AACCAAAACTGATATATTGAGCCATTCG 115612 ||||| ||||||| || ||||||||||| Sbjct 225806 AACCATAACTGATTTAATGAGCCATTCG 225833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397035532772704