Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq6 134 3e-26 seq3 134 3e-26 seq33 131 4e-25 seq37 116 9e-21 >seq6 Length=17716291 Score = 134 bits (148), Expect = 3e-26 Identities = 147/194 (76%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | ||| ||||| || ||||| | || || || || ||| Sbjct 10619640 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAG 10619699 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || ||| ||||| || || ||||||||||| || || |||||| Sbjct 10619700 ATCAGACGCTGCTG---GTCTAGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACG 10619756 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||||| | || || || || ||||| ||||| || ||||| |||||| Sbjct 10619757 TTCTCAATGGTCTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGCGTCTTG 10619816 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 10619817 ACGAAGATCTGCAT 10619830 Score = 134 bits (148), Expect = 3e-26 Identities = 147/194 (76%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | ||| ||||| || ||||| | || || || || ||| Sbjct 10619868 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAG 10619927 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || ||| ||||| || || ||||||||||| || || |||||| Sbjct 10619928 ATCAGACGCTGCTG---GTCTAGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACG 10619984 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||||| | || || || || ||||| ||||| || ||||| |||||| Sbjct 10619985 TTCTCAATGGTCTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGCGTCTTG 10620044 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 10620045 ACGAAGATCTGCAT 10620058 Score = 134 bits (148), Expect = 3e-26 Identities = 147/194 (76%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | ||| ||||| || ||||| | || || || || ||| Sbjct 10620096 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAG 10620155 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || ||| ||||| || || ||||||||||| || || |||||| Sbjct 10620156 ATCAGACGCTGCTG---GTCTAGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACG 10620212 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||||| | || || || || ||||| ||||| || ||||| |||||| Sbjct 10620213 TTCTCAATGGTCTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGCGTCTTG 10620272 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 10620273 ACGAAGATCTGCAT 10620286 Score = 134 bits (148), Expect = 3e-26 Identities = 147/194 (76%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | ||| ||||| || ||||| | || || || || ||| Sbjct 10620324 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAG 10620383 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || ||| ||||| || || ||||||||||| || || |||||| Sbjct 10620384 ATCAGACGCTGCTG---GTCTAGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACG 10620440 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||||| | || || || || ||||| ||||| || ||||| |||||| Sbjct 10620441 TTCTCAATGGTCTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGCGTCTTG 10620500 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 10620501 ACGAAGATCTGCAT 10620514 Score = 131 bits (144), Expect = 4e-25 Identities = 146/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | ||| ||||| || ||||| | || || || || ||| Sbjct 10620552 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAG 10620611 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || ||| ||||| || || ||||||||||| || || |||||| Sbjct 10620612 ATCAGACGCTGCTG---GTCTAGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACG 10620668 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||||| | || || || || ||||| ||||| || ||||| |||||| Sbjct 10620669 TTCTCAATGGTCTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTG 10620728 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 10620729 ACAAAGATCTGCAT 10620742 >seq3 Length=24902066 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324 || ||||||| ||| |||||||||||| || || || | ||| ||||| || ||||| Sbjct 14702341 ACAAGATGAAGGGTGGATTCTTTTTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCA 14702400 Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGG 288384 | || ||||| || |||||||| | ||| || | || || ||||| || |||||| Sbjct 14702401 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGG 14702460 Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTC 288444 || || | |||||||| || | || ||||| | ||||| || || ||||| ||||| Sbjct 14702461 ATCTTGGTCTTCACGTTCTCCACAGTGTCGCTGGGCTCTACCTCAAGAGTGATGGTCTTG 14702520 Query 288445 CCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||||||||| || ||||| Sbjct 14702521 CCTGTGAGGGTCTTGACGAAAATTTGCAT 14702549 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324 || ||||||| ||| |||||||||||| || || || | ||| ||||| || ||||| Sbjct 14702569 ACAAGATGAAGGGTGGATTCTTTTTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCA 14702628 Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGG 288384 | || ||||| || |||||||| | ||| || | || || |||||||| |||||| Sbjct 14702629 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTCCTGG 14702688 Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTC 288444 || || || ||||| || || || | || || | || || || || || || || || Sbjct 14702689 ATCTTGGCCTTCACATTGTCAATGGTGTCACTGGCCTCAACCTCAAGGGTAATGGTTTTG 14702748 Query 288445 CCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||||||||| |||||||| Sbjct 14702749 CCTGTGAGGGTCTTGACGAAGATCTGCAT 14702777 >seq33 Length=5647056 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||| | ||| |||||| ||||| || ||||| | ||| ||||| || ||| Sbjct 6652 AGGACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCT 6593 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || || || |||||||| | || || | ||||| ||||| || ||| Sbjct 6592 TCCAGCTGCTTGCCGGCAAAGATCAGCCTTTGCTGGTCAGGGGGGATGCCTTCCTTGTCC 6533 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| || || ||||||||||| || | || || | || || || || ||||| ||| Sbjct 6532 TGGATCTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 6473 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| |||||||| || |||||||| Sbjct 6472 TTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 6441 Score = 129 bits (142), Expect = 1e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 288243 ATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTC 288302 ||| ||||| | || | || || ||||| | ||| ||| || ||||| || ||||| Sbjct 8271 ATGACCACCCCTCAGGCGCAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTC 8212 Query 288303 GGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATC 288362 | ||| ||||| || ||||| | ||||| || || |||||||| | || || | Sbjct 8211 AGAGAGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATCAGCCTTTGCTGGTCAGG 8152 Query 288363 TGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 ||||| || || || |||||||| || || ||||||||||| || | || || | || Sbjct 8151 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTC 8092 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| || ||||| |||||||| || |||||||| Sbjct 8091 AACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 8041 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||| | ||| |||||| ||||| || ||||| | ||| ||||| || ||| Sbjct 6424 AGGACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCT 6365 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || || || |||||||| | || || | ||||| || || || ||| Sbjct 6364 TCCAGCTGCTTGCCGGCAAAGATCAGCCTTTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 6305 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| || || ||||||||||| || | || || | || || || || ||||| ||| Sbjct 6304 TGGATCTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 6245 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| |||||||| || |||||||| Sbjct 6244 TTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 6213 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||| | ||| ||| || ||||| || ||||| | ||| ||||| || ||| Sbjct 6880 AGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCT 6821 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || || || |||||||| | || || | ||||| ||||| || ||| Sbjct 6820 TCCAGCTGCTTGCCGGCAAAGATCAGCCTTTGCTGGTCAGGGGGGATGCCTTCCTTGTCC 6761 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| || || ||||||||||| || | || || | || || || || ||||| ||| Sbjct 6760 TGGATCTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 6701 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| |||||||| || |||||||| Sbjct 6700 TTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 6669 >seq37 Length=6129110 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || ||||| |||| ||| || || || || |||||||| | ||| ||||| || || Sbjct 1723248 AGCACGAGGTGAAGGGTGGACTCCTTCTGAATGTTATAGTCAGAGAGGGTGCGGCCATCC 1723189 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | ||| || || || |||||||||||||| || | ||||| ||||| |||||| Sbjct 1723188 TCAAGTTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCAGAGGGGATGCCTTCCTTATCC 1723129 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 | ||| | || ||||| || || || | | | | || ||||| | ||||| ||| Sbjct 1723128 TTGATCTGGGCCTTCACATTCTCAATGGCGCAGTTTGGCTCCACTTCCAAGGTGATGGTC 1723069 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||||||||| |||||||| Sbjct 1723068 TTGCCAGTTAGGGTCTTGACGAAGATCTGCAT 1723037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179570485284256