Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2 187 3e-42 seq390 93.3 5e-14 seq73 93.3 5e-14 >seq2 Length=17630497 Score = 187 bits (206), Expect = 3e-42 Identities = 598/913 (65%), Gaps = 31/913 (3%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||| | |||| | |||| ||||| |||| ||| |||||||||||| Sbjct 6622614 TAGATGTTGCTGGTGTAGGCTTCAATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 6622555 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || |||||||| || |||| || || ||||| | | || | | || |||| Sbjct 6622554 GCGGTGGGCATCGGGGCCAGCAGCAGACTGTTCCTCACCCCGTGCTTGGCGATCTTTTCC 6622495 Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGT---CTCCCCCTGCCACATATCAAACTGG 114118 ||||| | |||||| | ||||| || | | || |||||| || ||||| Sbjct 6622494 TTGAGCAGCTTCCAGTCCCAC---AGCTTGGTGGGCGTCTTCTCCCACATGTCGTACTGG 6622438 Query 114119 AGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCC 114178 ||||| || | | | | || || || || |||||||||| ||||| | | ||| Sbjct 6622437 AGGATGCCCTTGCTGACGGGGGAGCCTTCGTATGTCTCGTAGGGGCCGAGCTCGGCGGCC 6622378 Query 114179 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATT 114238 | ||| |||| |||| ||||| || | || || |||||||| || || |||| Sbjct 6622377 AGCTCGCAGCTGCCCTCCAGGGCGGCATAGTAGATGGTCTCAAAGATTTGAATGTTCAGC 6622318 Query 114239 GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCT 114298 || ||||| | || || ||| | || | || || || || | |||| Sbjct 6622317 AGCTGCGCCTCAGGGCTTTCGAATGCGTGACGCATGAGGATGAAGGTGTCTGCCAAACCT 6622258 Query 114299 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACG 114355 |||||||||| || ||||| || || | | | || ||||| || ||| ||| Sbjct 6622257 TGGACACCGATTCCTATTGGCCGGTGACGCTTGTTGGACTTCTCTGC---CTCAGGCACT 6622201 Query 114356 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 114415 || || || || |||| || | | | || | ||||||| | || || || | || Sbjct 6622200 GGGTAGAAGTTAATATCTATGATCTTGTTCAAATTTTTGACAATTACTTTGGTCA---CA 6622144 Query 114416 TGAAGCT--TTTCGTAA--TCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGC 114471 | ||||| ||| ||| |||||| | || |||| |||||||| | || || Sbjct 6622143 T-AAGCTAGTTTTTTAAAGTCAAAAGTCCG---CTCTGGGGTGACATACATGTTGAGTGC 6622088 Query 114472 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 114531 |||||| ||||||||||| || | | ||| || |||||||| || ||||| || Sbjct 6622087 GATTGAGGCCAGATTACAGACGGCGACCTCGTCACCGCTGGTGTACTCAATGATTTCTGT 6622028 Query 114532 ACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 114591 |||| || ||||| |||||||||| ||||| || || ||| |||| || | Sbjct 6622027 GCACAGGTTGCTGCTCTTGATGGTGCCCAGGTTCTGATGGTTGCTCTTCCTGTTGCAGGA 6621968 Query 114592 ATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 114651 || ||||| |||||||||||||| || || ||||| ||||||| | || || | ||| Sbjct 6621967 GTCTTTGTAGAGCATGTATGGCGTGCCAGTTTCCGTCTGGGACTCAATGATGGCGTGCCA 6621908 Query 114652 GA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGA 114710 | | | | | || || || || | || || || | ||| || ||||||| Sbjct 6621907 AAGCTGCTGAGCCTTCACCACACGC-TTCACCCGGCCTTCTTTCTCATATGAGGTGTAGA 6621849 Query 114711 GGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGGCAGAAG 114769 | || ||||| || ||| | ||| ||||| || || || | ||| || | Sbjct 6621848 GCTTCTCGAACTCCTCCCCCCAGCACTCGTCCAGCCC-GGGGCATTCGTTTGGACACATC 6621790 Query 114770 AGAGACCATTGACCACCCT--CCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAG 114827 |||||||| | || | | ||| || | ||||||||| ||||| |||||||| || | Sbjct 6621789 AGAGACCA--GTCCTCGTTGGTCTCCACCCTCTTCATGAACAGGTCGGGGATCCACAGGG 6621732 Query 114828 CTGAGAAGAGATC 114840 | ||||||| || Sbjct 6621731 CGTAGAAGAGGTC 6621719 >seq390 Length=2268 Score = 93.3 bits (102), Expect = 5e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 |||| || | | |||||| || || |||||| ||| || ||||| || || | ||||| Sbjct 2044 CCTCATCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 1985 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACG 126185 ||| |||||| || ||| || ||||| |||||||||||||||||||| ||||||| Sbjct 1984 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGGCGGCGAACG 1925 Query 126186 C 126186 | Sbjct 1924 C 1924 >seq73 Length=1910340 Score = 93.3 bits (102), Expect = 5e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 |||| || | | |||||| || || |||||| ||| || ||||| || || | ||||| Sbjct 1745250 CCTCATCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 1745309 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACG 126185 ||| |||||| || ||| || ||||| |||||||||||||||||||| ||||||| Sbjct 1745310 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGGCGGCGAACG 1745369 Query 126186 C 126186 | Sbjct 1745370 C 1745370 Score = 93.3 bits (102), Expect = 5e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 |||| || | | |||||| || || |||||| ||| || ||||| || || | ||||| Sbjct 1749142 CCTCATCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 1749201 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACG 126185 ||| |||||| || ||| || ||||| |||||||||||||||||||| ||||||| Sbjct 1749202 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGGCGGCGAACG 1749261 Query 126186 C 126186 | Sbjct 1749262 C 1749262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597312143660160