Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2 150 2e-31 seq33 95.1 1e-14 seq3 95.1 1e-14 >seq2 Length=17630497 Score = 150 bits (166), Expect = 2e-31 Identities = 700/1097 (64%), Gaps = 42/1097 (4%) Strand=Plus/Minus Query 153075 TTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTC 153134 ||||| ||| | | ||||| ||| ||||| ||||| || || || || |||| ||||| Sbjct 6622608 TTGCTGGTGTAGGCTTCAATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCGGTG 6622549 Query 153135 GGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAAC 153194 ||||| |||| || || | |||| || |||||| || | ||||| | | Sbjct 6622548 GGCATCGGGGCCAGCAGCAGACTGTTCCTCACCCCGTGCTTGGCGATCTTTTCCTTGAGC 6622489 Query 153195 GCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCT 153254 || ||| ||||||||| | || ||| | ||||||||||||||| | | || Sbjct 6622488 AGCTTCCAGTCCCACAGCTTGGTGGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCC 6622429 Query 153255 CGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCG-TCGCGTTGGGCCAGTTCGCA 153313 ||| |||| ||| | | || |||| |||| | || |||||| ||||| Sbjct 6622428 TTGCTGACGGGGGAGCCTTCGTATGTCTCGTAGGGGCCGAGCTCG-GCGGCCAGCTCGCA 6622370 Query 153314 GCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGC 153373 ||| |||| || ||| ||||||| ||||| || |||||| | || || | ||| Sbjct 6622369 GCTGCCCTCCAGGGCGGCATAGTAGATGGTCTCAAAGATTTGAATGTTCAGCAGCTGCGC 6622310 Query 153374 TTCTTCGCTCTCGTACGGCATG-CGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATAC 153432 || ||| ||| | || || |||| || | |||| ||| |||| ||| |||| || Sbjct 6622309 CTCAGGGCTTTCG-AATGCGTGACGCATGAGGATGAAGGTGTCTGCCAAACCTTGGACAC 6622251 Query 153433 CGACGCCGATGGGTCGATGCTTCTCGTTG-----CTGCGCCTCGCGCTCGCTATGGGATA 153487 ||| || || || || || || |||| || ||||| || | |||| || Sbjct 6622250 CGATTCCTATTGGCCGGTGACGCTTGTTGGACTTCTCTGCCTCAGGCAC----TGGG-TA 6622196 Query 153488 GTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGT--TATCGCCTTA 153545 | || ||| || || ||||| | || || | ||||| || || || Sbjct 6622195 GAAGTTAATATCTATGATCTTGTTCAAATTTTTGACAATTACTTTGGTCACATAAGCT-- 6622138 Query 153546 AGTTTCTCGAAATCATAGGTCATTTC-GTCGACGCGTACGCATCGATTCACGGCAATAGA 153604 ||||| | || ||| | ||| || | | | || ||| || | || || || Sbjct 6622137 AGTTTTTTAAAGTCAAAAGTCCGCTCTGGGGTGACATA--CAT--GTTGAGTGCGATTGA 6622082 Query 153605 CGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAG 153664 ||||||||||||||||| ||| || || | |||||| | ||| || | ||| || Sbjct 6622081 GGCCAGATTACAGACGGCGACCTCGTCACCGCTGGTGTACTCAATGATTTCTGTGCACAG 6622022 Query 153665 GTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTT 153724 |||||||| || ||| ||||| || || || ||||| || | ||||| | |||||| Sbjct 6622021 GTTGCTGCTCTTGATGGTGCCCAGGTTCTGATGGTTGCTCTTCCTGTTGCAGGAGTCTTT 6621962 Query 153725 GAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT--------AAACCTA 153776 | |||||||||| || ||| || || || | || | ||| ||| | Sbjct 6621961 GTAGAGCATGTATGGCGTGCCAGTTTCCGTCTGGGACTCAATGATGGCGTGCCAAAGC-- 6621904 Query 153777 TGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTAC 153836 ||| | ||| | | ||| |||| | ||||| || |||| ||| ||| Sbjct 6621903 TGCTGAGCCTTCAC---CACACGCTTC---ACCCGGCCTTCTTTCTCATATGAGGTGTAG 6621850 Query 153837 AGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATC 153896 || ||| ||||| || || |||| ||| | || ||||| || | | ||||||||| Sbjct 6621849 AGCTTCTCGAACTCCTCCCCCCAGCACTCGTCCAGCCCGGGGCATTCGTTTGGACACATC 6621790 Query 153897 AGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCG 153956 || ||||| |||| || | || | ||||||||| || || | ||| || ||| Sbjct 6621789 AGAGACCAGTCCTCGTTGGTCTCCACCCTCTTCATGAACAGGTCGGGGATCCACAGGGCG 6621730 Query 153957 TACATGAGGTCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAGCACG 154016 || | |||||| | ||| | |||||| || |||| ||||| | || | | Sbjct 6621729 TAGAAGAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTTTTTCTTCAGCTCCAGGAAG 6621670 Query 154017 CTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTT 154073 | | | || ||||||||| || | ||| | ||| | || || | | || Sbjct 6621669 TCAAACACATCAAAGTGCCAGGGCTCCAAGTACATGGCGAAAGCTCCGGGCCTCTTGTTG 6621610 Query 154074 CCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCG 154133 |||||||| ||||||| ||| || | |||||| | || | || |||||| | || || Sbjct 6621609 CCGCCCTGGTCGACGTACCGCGCCGTGTTGTTGTACACTCTCAGCATGGGGACTAGACCA 6621550 Query 154134 CTTGCGGTGCCGTTGGT 154150 | | | |||||||||| Sbjct 6621549 TTGGAGTTGCCGTTGGT 6621533 >seq33 Length=5647056 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| | || ||||| || | ||| | | | || ||||| || ||||||||||| Sbjct 11794 GCCGCCCCTCAGACGCAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGA 11735 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || || || || || |||| | |||| || | ||| ||||| || || Sbjct 11734 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGG 11675 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| ||||| ||| || || | | ||| | |||||| | | ||| || Sbjct 11674 GATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTTTCAATGGTGTCACTGGGCTCAAC 11615 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGG 138616 ||| | || | || || |||||||| || || ||||| |||||||||| Sbjct 11614 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACAAAGATCTGCATGG 11565 >seq3 Length=24902066 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| | || ||||| || | ||| | | | ||||| || || ||||||||||| Sbjct 14702778 GCCGCCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGA 14702837 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || || || || || |||| | |||| || | ||| ||||| || || Sbjct 14702838 GAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGG 14702897 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||||||||| ||| || || | |||| || | |||||| | | || | Sbjct 14702898 AATGCCTTCTTTGTCCTGGATCTTGGCCTTCACATTG-TCAATGGTGTCACTGGGTTCAA 14702956 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGG 138616 |||| | || | ||||| ||||| || ||||| ||||| |||||||||| Sbjct 14702957 CCTCAAGGGTGATGGTTTTGCCAGTGAGGGTTTTGACAAAGATCTGCATGG 14703007 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || | || |||||| || | ||| | | | || || ||||| |||||||| || Sbjct 14702550 GCCCCCCCTCAGACGCAAGACAAGATGAAGGGTGGATTCTTTTTGGATGTTGTAATCAGA 14702609 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || || || || || |||| | |||| || | ||| ||||| ||||| Sbjct 14702610 GAGGGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGG 14702669 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||||||||| ||| || || | |||| || | |||||| | | ||| | Sbjct 14702670 AATGCCTTCTTTGTCCTGGATCTTGGCCTTCACATTG-TCAATGGTGTCACTGGCCTCAA 14702728 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| | || | ||||| || || || || || || || ||||||||| Sbjct 14702729 CCTCAAGGGTAATGGTTTTGCCTGTGAGGGTCTTGACGAAGATCTGCATG 14702778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496227959389440