Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq3 111 1e-19 seq2 102 8e-17 seq33 91.5 1e-13 seq18 86.0 6e-12 >seq3 Length=24902066 Score = 111 bits (122), Expect = 1e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||| ||| | || || ||||| || || || || ||| | || || | Sbjct 14701991 CGCAGGACCAGATGGAGGGTGGATTCTTTCTGGATGTTATAGTCGGAGAGGGTTCGGCCA 14702050 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || ||||||||||| ||||| |||||| | ||||||||| ||||| ||||| |||||| Sbjct 14702051 TCCTCTAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGAGGGATGCCTTCCTTG 14702110 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| ||| || ||| | | ||| || ||||| || ||| || || | ||| | Sbjct 14702111 TCCTGGATCTTGGCCTTCACATTTTCAACTGTGTCACTAGCCTCAACCTCCAGGGTGATG 14702170 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || ||||| ||||| || || ||||| || |||||| || Sbjct 14702171 GTCTTGCCAGTCAGGGTCTTGACAAAGATTTGCATGCCT 14702209 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||| ||| | || || ||||| || || || || ||| | || || | Sbjct 14701535 CGCAGGACCAGATGGAGGGTGGATTCTTTCTGGATGTTATAGTCGGAGAGGGTTCGGCCA 14701594 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || ||||||||||| ||||| |||||| | ||||||||| ||||| ||||| |||||| Sbjct 14701595 TCCTCTAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGAGGGATGCCTTCCTTG 14701654 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| ||| || || | | || || ||||| | ||| || || | ||| | Sbjct 14701655 TCCTGGATCTTGGTTTTCACATTCTCAACAGTGTCACTGGCCTCAACCTCTAGGGTGATG 14701714 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || ||||| ||||| || || ||||| ||||||||| Sbjct 14701715 GTCTTGCCAGTCAGGGTCTTGACAAAGATCTGCATG 14701750 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||| ||| | || || ||||| || || || || ||| | || || | Sbjct 14701763 CGCAGGACCAGATGGAGGGTGGATTCTTTCTGGATGTTATAGTCGGAGAGGGTTCGGCCA 14701822 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || ||||||||||| ||||| |||||| | ||||||||| ||||| ||||| |||||| Sbjct 14701823 TCCTCTAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGAGGGATGCCTTCCTTG 14701882 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| ||| || || | | || || ||||| | ||| || || | ||| | Sbjct 14701883 TCCTGGATCTTGGTTTTCACATTCTCAACAGTGTCACTGGCCTCAACCTCTAGGGTGATG 14701942 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || ||||| ||||| || || ||||| ||||||||| Sbjct 14701943 GTCTTGCCAGTCAGGGTCTTGACAAAGATCTGCATG 14701978 >seq2 Length=17630497 Score = 102 bits (112), Expect = 8e-17 Identities = 481/745 (65%), Gaps = 28/745 (4%) Strand=Plus/Minus Query 146044 AGGGCCTTGATGAGATACTGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGA 146103 ||| | |||| |||| | || || | ||| ||||| |||| ||| || | | Sbjct 6622674 AGGTCTTTGAGCAGATGGGGATTCACTATCTGGAACTCTCCGGAGAGGACCCTGCGGGTG 6622615 Query 146104 TACACGTTGCTGGTGAACGGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTA 146163 || | |||||||||| | | || | ||||||||||| || || ||||| || || | Sbjct 6622614 TAGATGTTGCTGGTGTAGGCTTCAATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 6622555 Query 146164 GCGGTAGGCATGTACGCCACCAGCAAAGAGTTTCTCACGCCGTGTCTTTGA-ATCTTTTC 146222 ||||| ||||| |||| ||||| | ||| ||||| ||||| ||| | |||||||| Sbjct 6622554 GCGGTGGGCATCGGGGCCAGCAGCAGACTGTTCCTCACCCCGTG-CTTGGCGATCTTTTC 6622496 Query 146223 CC---GTAGTTTGGACCAATTCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTA 146279 | | || || ||| | ||||| | | ||||| | | | ||||||| Sbjct 6622495 CTTGAGCAGCTT---CCAGTCCCACA---GCTTGGTGGGCGTCTTCTCCCACATGTCGTA 6622442 Query 146280 ATGCATAGTGCC---GCGGAACAGGGGGCTATTCTCGTACGATTCATAAGGACCGTCGAT 146336 || | |||| || || ||| || | |||| | || || || ||| | | Sbjct 6622441 CTGGAGGATGCCCTTGCTGACGGGGGAGCCTT---CGTATGTCTCGTAGGGGCCGA-GCT 6622386 Query 146337 CTT-GGCCAGTTCGCAGCTAGCTTCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGT 146395 | |||||| |||||||| | ||||| || | | |||| |||||||| ||| || Sbjct 6622385 CGGCGGCCAGCTCGCAGCTGCCCTCCAGGGCGGCATAGTAGATGGTCTCAAAGATT-TGA 6622327 Query 146396 A-GTTGACGCTCCTG-GCCTCCTCGCTGTCGTAGGGGATATCGAGAAGCACAAAGGCGTC 146453 | ||| | || ||| ||||| ||| ||| | | | | | || | |||| ||| Sbjct 6622326 ATGTTCA-GCAGCTGCGCCTCAGGGCTTTCGAATGCGTGACGCATGAGGATGAAGGTGTC 6622268 Query 146454 GGCGAGACCCTGTATCCCGACACCAACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCC 146513 || | ||| || | |||| || | || ||||| |||||| ||| | || | Sbjct 6622267 TGCCAAACCTTGGACACCGATTCCTATTGGCCGGTGACGCTTGTTGGACTTCTCTGCCTC 6622208 Query 146514 CG-CAGTGGGATAGTGGTTGCTGTCGATGATCTTGTTGAGATTACGCACGACAATTTTCG 146572 | || |||| ||| ||| | || ||||||||||| | ||| || | | ||| | Sbjct 6622207 AGGCACTGGG-TAGAAGTTAATATCTATGATCTTGTTCAAATTTTTGACAATTACTTTGG 6622149 Query 146573 TCAAACGATTCAGCAGGACATAGTCAAATGTTTTAGTTTTAACGTTGACGCACTTGTTGA 146632 ||| | | || | ||||||| || | | | || ||| || |||||| Sbjct 6622148 TCACATAAGCTAGTTTTTTAAAGTCAAAAGTCC--GCTCTGGGGT-GACATACATGTTGA 6622092 Query 146633 CGGCGATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCT 146692 ||||| ||||||| ||||| ||||| |||||| | | |||| | || | Sbjct 6622091 GTGCGATTGAGGCCAGATTACAGACGGCGACCTCGTCACCGCTGGTGTACTCAATGATTT 6622032 Query 146693 CGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAACTTGTTGC 146752 | | ||| |||||||||| ||||||| |||||| || | ||||| || | |||||| Sbjct 6622031 CTGTGCACAGGTTGCTGCTCTTGATGGTGCCCAGGTTCTGATGGTTGCTCTTCCTGTTGC 6621972 Query 146753 AGGGGTCCTTGTAGAGCATGTACGG 146777 ||| ||| |||||||||||||| || Sbjct 6621971 AGGAGTCTTTGTAGAGCATGTATGG 6621947 >seq33 Length=5647056 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| || | ||| | || || ||||| || || ||||| || | ||||| | Sbjct 6199 CGCAGGACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCA 6140 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || || |||||| | |||||| || || || |||||||||||| Sbjct 6139 TCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTG 6080 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| ||| || ||| | | ||| | |||||| | ||| || || | ||| | Sbjct 6079 TCCTGGATCTTGGCCTTCACATTTTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATG 6020 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| ||||| || || ||||| |||||||| Sbjct 6019 GTCTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 5985 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| || | ||| | || || ||||| || || || || || | |||||| | Sbjct 12009 CGCAGGACAAGATGGAGGGTGGATTCTTTCTGGATGTTATAGTCAGAGAGGGTGCGACCA 11950 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || ||||| |||||| | ||||||||| || || |||||||||||| Sbjct 11949 TCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGCGGGATGCCCTCCTTG 11890 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| ||| || ||| | | || | |||||| | || || || | ||| | Sbjct 11889 TCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGTTCAACCTCCAGGGTGATG 11830 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || ||||| ||||| || || || || ||||||||| Sbjct 11829 GTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATG 11794 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| || | ||| | || || ||||| || || ||||| || | ||||| | Sbjct 6427 CGCAGGACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCA 6368 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || || |||||| | ||||| || || || |||||||||||| Sbjct 6367 TCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTTTGCTGGTCAGGGGGGATGCCCTCCTTG 6308 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| ||| || ||| | | ||| | |||||| | ||| || || | ||| | Sbjct 6307 TCCTGGATCTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATG 6248 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| ||||| || || ||||| |||||||| Sbjct 6247 GTCTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 6213 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| || | ||| | || || || || || || ||||| || | ||||| | Sbjct 8255 CGCAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCA 8196 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || |||||||| || || |||||| | ||||| || || || |||||||||||| Sbjct 8195 TCTTCCAGCTGTTTGCCGGCAAAGATCAGCCTTTGCTGGTCAGGGGGGATGCCCTCCTTG 8136 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| ||| || ||| | | ||| | |||||| | ||| || || | ||| | Sbjct 8135 TCCTGGATCTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATG 8076 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| ||||| || || ||||| |||||||| Sbjct 8075 GTCTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 8041 >seq18 Length=14161719 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 146680 TACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTA 146739 |||| || ||||| | ||| || |||||| | |||||| |||||| || | |||||| Sbjct 3645549 TACTCTACTATCTCCGTGCACAGATTGCTGGATTTGATGGTGCCCAGGTTCTGCTGGTTA 3645608 Query 146740 CTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTC 146789 || | ||||||||| |||||||||||| ||||||||| || ||||| Sbjct 3645609 CTCTTCCTGTTGCAGGCGTCCTTGTAGAGTATGTACGGTGTGCCCGTTTC 3645658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475467800244480