Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq6 114 2e-20 seq5 89.7 7e-13 >seq6 Length=17716291 Score = 114 bits (126), Expect = 2e-20 Identities = 191/276 (69%), Gaps = 0/276 (0%) Strand=Plus/Minus Query 8892 ACGGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGTTGCGGTTTTCACGATGT 8951 |||||||| ||||||||| ||| | |||| || | || || | ||||| || | Sbjct 5280019 ACGGACATGTCTTCACATTATTACAGACGAGGCTCTTTAGTGTGGCTGAGTTCACTATAT 5279960 Query 8952 CTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACGT 9011 | || || || | || || ||||||||||| |||||||| |||| || || ||| || Sbjct 5279959 CAAAGCCCACTTTGCCCCCAAAGGTGCTGGGCTTCCAGTATTCCGGAGAACATATGGGGT 5279900 Query 9012 TCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAGA 9071 | ||| ||| ||||| | ||| ||||| || |||| ||| | |||||||| || || | Sbjct 5279899 TTCCCAGGAGGCCTTTAAGGGAGAACGGGGCACCCATCTCCACCATGCTCTCTCCAAATA 5279840 Query 9072 TGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGACAGCCTCGACGT 9131 | ||||| || | | ||| || | | | ||||| || | ||| | || || |||| Sbjct 5279839 TAGCACCCGGTCTTGTTTTCTCCAACAGCAGGCCAGGATAAAATTCAAGCGCATCAACGT 5279780 Query 9132 CGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCT 9167 | ||||| | |||| | ||| ||||| |||| Sbjct 5279779 CACCATACATCTCTTCAAGCTCACGGGCTATTTCCT 5279744 >seq5 Length=21819443 Score = 89.7 bits (98), Expect = 7e-13 Identities = 106/142 (75%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 9754 TCGTCACCCCATTCCGGGTGTTCGTGTTTGAGAACATCGCAGACCCTGTTGTGTTCTCTC 9813 |||||| |||| || ||||| | | ||| |||||||| || ||||||||||| || | Sbjct 3819428 TCGTCATCCCAGTCAGGGTGGACCTCTTTCAGAACATCACATACCCTGTTGTGCTCCCGT 3819369 Query 9814 AGCCATATGGTGGCGTACATCATTAAACCCGGCACTAAACCAAACACTTCATTCCCCACT 9873 ||||| ||||||||||||||||| | || || || | ||||| | || | || || Sbjct 3819368 AGCCAGATGGTGGCGTACATCATCAGGCCGGGAACCAGGCCAAAGGCCTCGTGGCCAACA 3819309 Query 9874 GCAAAGCG--CAGATCATCGGG 9893 || ||||| ||||| ||||| Sbjct 3819308 GCGAAGCGTTCAGAT--TCGGG 3819289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723677773276800