Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mola_20mola_20[genbank_20GCA_5F001698575.1_202016-08-08] 5,552 sequences; 639,451,992 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq50 215 4e-50 seq49 163 2e-34 seq2 113 3e-19 seq6 87.8 1e-11 >seq50 Length=5617500 Score = 215 bits (238), Expect = 4e-50 Identities = 939/1464 (64%), Gaps = 26/1464 (2%) Strand=Plus/Minus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 |||| ||| || ||||| || || ||||| | ||||| || || || | || || || Sbjct 141625 GCAGACACGTTCAGAATGCCGTTAGCATCGATGTCAAACGTTACCTCTACCTGTGGTACA 141566 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 |||| ||||||| ||||| || | | ||| | |||||| || ||||| || Sbjct 141565 CCTCGGGGAGCAGGGGGGATACCCGTGAGCTCAAACTTGCCCAGAAGGTTGTTATCCTTG 141506 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438 || | || |||||||| | | || || || | | || || || || || Sbjct 141505 GTCATGGCTCTCTCACCCTCATATACCTGAATCAGCACACCTGGCTGGTTGTCAGAGTAT 141446 Query 517439 GTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 517497 || | || | ||||| | | || || || |||||||||| | || | | || Sbjct 141445 GTGGAGAAGA-TCTGGGTCTGCTTGGTGGGGATGGTTGTGTTTCGTTTGATTAGAGGCGT 141387 Query 517498 CATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 517557 ||| | |||||||| || || | ||| ||||| ||||||| || || | || | | Sbjct 141386 CATGACTCCACCTGCAGTCTCAATACCCAGAGACAGAGGAGCCACGTCCAGAAGCAGCAG 141327 Query 517558 ATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATA 517617 || ||| | || || ||| | ||| | || ||||| || || | | |||||| | Sbjct 141326 ATCTTGGACATTCTCTGAAGTATCACCCATGAGGATAGCAGCCTGGACCGATGCACCACA 141267 Query 517618 TGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT-TG 517676 || ||||||||||| ||||| | | | || |||| | | ||||| ||||| | || Sbjct 141266 GGCTACAGCTTCATCTGGATTGATGCTCTTGTTCAGTTCTCTGCCATTAAAAAAGTCCTG 141207 Query 517677 AAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 517735 || ||| | ||| | || ||||| | | || || ||||| | ||||||||||| Sbjct 141206 CAA-AAGCT-TCTGGATTTTGGGAATTCTCGTAGAGCCACCAACCAGAACAATTTCATGA 141149 Query 517736 ACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCT 517795 | || || |||||||| || | ||| | | || ||||| || || || | Sbjct 141148 ATCTTGGACTTATCCAGCTTGGCATCTTGCAGGGCCTTCTCAACTGGCTCCAGCGTTCCC 141089 Query 517796 CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAA--GAG-TGACATTATAA 517852 || || | || || |||||||| || || || |||| ||| || || || Sbjct 141088 CTGAAAAGCTCCGAGTTGAGTTCTTCAAACCGTGCCCTCGTAATGGAGGTG----TAGAA 141033 Query 517853 -TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 517911 ||||| || || |||| |||||| | ||||| ||| || || || || || | Sbjct 141032 GTCAATGCCCTCAAACAGAGAATCGATCTCAATACTAGCCTGGGTGCTGGAGGACAGGGT 140973 Query 517912 ACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT--GATTC 517969 | || || | || || ||||| | || || | | ||| | || ||| | | Sbjct 140972 CCTCTTGGCTCTCTCGCAAGCTGTGCGCAGCCTCCTCACAGCTCT--CTTATTTTGGCTG 140915 Query 517970 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTAT 518027 | || | || | ||||||||| || || |||||| | ||| |||| | | || | Sbjct 140914 ATGTCCTTCTTGTGTTTTCTCTTAAATTCCTCAACAAA--ATGGTTTACCATCCTGTTGT 140857 Query 518028 CAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCAT 518087 |||| || || || || | | || | |||| || ||| | || | || | |||| Sbjct 140856 CAAAGTCCTCCCCGCCAAGATGTGTGTCACCTGCTGTGGCTTTCACCTCAAATATACCAT 140797 Query 518088 CTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT 518147 | |||| | | | | ||||||| || || ||||| | ||||| || || || | Sbjct 140796 CCTCAATGGTAAGGATGGATACATCAAAAGTGCCTCCACCAAGGTCAAAGATGAGCACGT 140737 Query 518148 TCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCAT 518207 | ||| | || |||||| | |||||| |||| || || || || || || | Sbjct 140736 TGCGCTCTCCCTTTTTTCCTTTATCCAAACCATAAGCAATGGCTGCTGCTGTGGGCTCGT 140677 Query 518208 TAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTT 518267 | || || |||| |||||| || |||| || || || || || ||||||||||| | Sbjct 140676 TGATGATCCTCAGAACATTCAGTCCAGAGATCACCCCGGCGTCCTTGGTGGCTTGTCTCT 140617 Query 518268 GTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATAT 518327 | || || || ||||| || ||||| || || || |||| | ||| || | || Sbjct 140616 GGGAGTCATTGAAATAAGCTGGAACTGTGATGACTGCATTTGACACT-CTCTGCCCCAGG 140558 Query 518328 AAGCGCTT-GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAA 518386 ||| || || | | ||||||||| | | ||| || || || | |||||| | Sbjct 140557 AAGGCCTCAGCAATCTCTTTCATTTTTACCAGGACCATGGAGGAGATCTCCTCTGGGTAG 140498 Query 518387 TATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATA 518446 | ||||| || || ||| || | | | || | | | |||| || Sbjct 140497 AAGGCCTTGGTCTCCCCTTTATACTCCACCTGTACTTTGGGCCTTCCATTATCATTGATC 140438 Query 518447 ACTTTAAATGGCCAGTATTTCATATCTGATTGAAC-ACTTTGGTCATTAAAATCTCTACC 518505 || ||||| ||||| |||||| || || || || |||||| || ||||| | |||||| Sbjct 140437 ACCTTAAAAGGCCATAGTTTCATGTCGGACTGGACTACTTTG-TCGTTAAACTTTCTACC 140379 Query 518506 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGC 518565 || | ||||| || ||||| || || ||||| || || || ||| | || | ||||| Sbjct 140378 GATGAGCCGTTTGGCGTCAAAGATTGTGTTGGTGGGGTTCATGGCAACCTGGTTCTTGGC 140319 Query 518566 TGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATT 518625 ||||||||||| || || || || ||||| | ||||| ||||| || | || Sbjct 140318 AGCATCTCCAATGAGCCTCTCAGTGTCAGTAAAGGCCACATAGCTGGGAGTGGTCCTGTT 140259 Query 518626 ACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAA 518685 || ||||| || ||||| || |||||||| || | || | || |||||||| | Sbjct 140258 GCCCTGATCGTTAGCAATGATCTCAACTTTGCCGTGCTGGAAAACCCCTACACATGAGTA 140199 Query 518686 AGTTGTTCCTAAATCAATACCAAT 518709 || || || |||||||| || || Sbjct 140198 GGTGGTACCCAAATCAATGCCGAT 140175 >seq49 Length=3270273 Score = 163 bits (180), Expect = 2e-34 Identities = 889/1409 (63%), Gaps = 18/1409 (1%) Strand=Plus/Plus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 |||| ||| || ||||| || ||||| |||| || || ||||| || || || || ||| Sbjct 1602080 GCAGACACGTTCAGAATTCCGTTGGCGTCCACGTCGAAGGTGACCTCGATCTGCGGCACC 1602139 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 |||| ||||||||||||| ||| || | ||| | ||||| || || || || Sbjct 1602140 CCTCGAGGAGCAGGTGGGATTCCTGTCAGCTCAAACTTGCCCAGCAGGTTGTTGTCCTTG 1602199 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438 || | || |||||| ||| | | ||||| || | | || |||||||| || Sbjct 1602200 GTCATGGCTCTTTCACCTTCGTAGACCTGGATGAGGACCCCGGGCTGGTTATCTGAGTAC 1602259 Query 517439 GTTGTAAATACTCTGGAT-TTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 517497 || || || || |||| | |||||| || || || | || | || || | || Sbjct 1602260 GTGGTGAAGAC-CTGGGTCTTTTTAGTTGGGATAGTGCTATTGCGTTCTATCAGGGCTGT 1602318 Query 517498 CATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 517557 ||| | || |||||||| || | || ||||| ||||| | || || | || | | Sbjct 1602319 CATGACGCCTCCTGCTGTCTCAATGCCCAGAGACAGAGGTGCCACGTCCAGCAGCAGCAG 1602378 Query 517558 ATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATA 517617 | |||| || | || | ||| ||||| || |||| | |||||||||||| Sbjct 1602379 GTCCTGAACATTACCTGAGGTATCACCTGTCAGAATGGCACCTTGGACAGCAGCACCATA 1602438 Query 517618 TGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGA 517677 || || || ||||| ||||| | | | ||| |||| ||| |||||||| |||| Sbjct 1602439 GGCCACCGCCTCATCTGGATTGATGCTCTTATTCAGTTCTTTCCCATTGAAGAAATCCTG 1602498 Query 517678 AAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCA 517736 || |||| ||| | | || || || | || |||||||| | |||| |||| | Sbjct 1602499 CAGGAGTT-TCTGGATTCTGGGGATTCGGGTGGAACCTCCAACCAGGACAACATCATCAA 1602557 Query 517737 CCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTC 517796 | || || |||| ||||| |||| | | | ||| || ||||| | | Sbjct 1602558 TTTTTGCCTTGTCCATTTTTGCATCCCTCAGGGCATGTTCCACTGGTTCCAATGTTTTCC 1602617 Query 517797 TAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TC 517854 | || | ||| || || || || || || ||| || || || || | || || || Sbjct 1602618 TGAAAAGGTCGGAGCACAGCTCCTCAAAGCGAGCCCTGGT--GATGGAGGTGTAGAAGTC 1602675 Query 517855 AATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACG 517914 || || || |||| |||||||| || || | | || | || || || | | Sbjct 1602676 GATGCCCTCAAACAGAGAATCAATCTCGATGCTGGCCTGGGAGCTGGACGACAGGGTTCT 1602735 Query 517915 TTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGG----CTTTTGCTGATTGATTCA 517970 || || | ||||| || || | || || | | || ||| | ||| |||| Sbjct 1602736 CTTGGCCCTCTCACAAGCCGTGCGCAGCCTCCTCAGGGCTCTCTTGTTCTGGCTGAT--- 1602792 Query 517971 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAA 518030 || | || | ||| |||||||| ||||| | | | | || | || || |||| Sbjct 1602793 -GTCCTTCTTGTGTTTCCTCTTGAATTCTTCTATAAAGTGGTTGACCATGCGGTTGTCAA 1602851 Query 518031 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 518090 | ||||| || |||| | ||| | ||| | || | | | || | || | ||||||| Sbjct 1602852 AGTCTTCTCCCCCCAGGTGAGTGTCTCCAGCTGTGGATTTCACCTCAAAGATGCCATCTT 1602911 Query 518091 CAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 518150 ||| || || | ||||| ||| || ||||||| ||||| || || || || Sbjct 1602912 CAATGACCAGAATGGACACATCGAAGGTGCCCCCACCCAGGTCAAAGATCAGGACGTTAC 1602971 Query 518151 TTTCT-TTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209 ||| || ||| | ||| || ||||| ||||| | || || || || || || || Sbjct 1602972 GCTCTCCTGACTT-GCCTTTGTCCAGACCGTACGCGATGGCGGCTGCTGTCGGCTCGTTG 1603030 Query 518210 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 518269 || || |||| ||||| || || || || ||||| |||||||| || || || || Sbjct 1603031 ATGATCCTCAGGACATTCAGTCCTGCGATGACGCCTGCGTCTTTAGTCGCCTGCCTCTGG 1603090 Query 518270 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAA 518329 || ||||| || || || || || || | ||| || | ||| |||| || ||| | || Sbjct 1603091 GAGTCGTTGAAGTACGCCGGCACTGTGACAACTGCGTTAGTCACTTTTTGACCGAGGTAG 1603150 Query 518330 GCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATAT 518389 || || | | ||||| || | | ||| || ||||| | || ||| | | Sbjct 1603151 GCCTCGGCAATCTCCTTCATCTTCACCAGGACCATGGAGGAAATCTCCTCAGGGCAGAAG 1603210 Query 518390 TGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACT 518449 |||| || || ||| || | || | || ||| ||| | || || Sbjct 1603211 GTCTTGTTCTCCCCTTTGTATTCCACCTGAATTTTGGGCTTACCTCCATCTCCAACCACC 1603270 Query 518450 TTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATT 518509 | || |||||| ||||| || ||||| || | |||| | | ||| ||||| Sbjct 1603271 TGGAAGGGCCAGAGCTTCATGTCACCCTGAACCATTGGATCATCCATCTTTCTTCCAATC 1603330 Query 518510 AATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCA 518569 | || || |||||||| | ||| ||| | || || | || | || | |||||||| Sbjct 1603331 AGTCTCTTGGCATCAAAGACAGTGTTGCTGGGGTTCAGGGCCACCTGGTTCTTGGCTGCG 1603390 Query 518570 TCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCT 518629 || ||||| || ||||| || || || | ||||| || || || | || || Sbjct 1603391 TCCCCAATGAGCCTCTCTGTGTCAGTGAACGCCACATAGCTGGGGGTGGTCCTGTTGCCC 1603450 Query 518630 TGATCATTCGCAATAATTTCAACTTTACC 518658 || || || || || ||||| ||||| || Sbjct 1603451 TGGTCGTTGGCGATGATTTCTACTTTCCC 1603479 >seq2 Length=17630497 Score = 113 bits (124), Expect = 3e-19 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 ||||| || || ||||| |||| |||||||||||||||||||||||| || | | ||| Sbjct 8353884 TTTTTGTCCAGGCCATAAGCAATAGCAGCAGCAGTTGGTTCATTAATGATACGAAGGACA 8353825 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || || |||| ||| | || |||||||| ||||| || | ||||| || ||||| || Sbjct 8353824 TTCAGGCCAGAAATGGTCCCCGCATCTTTGGTGGCCTGGCGCTGTGAGTCATTAAAGTAG 8353765 Query 518285 GCAGGAACAGTAATAACGGCAT 518306 ||||| ||||| | || |||| Sbjct 8353764 GCAGGCACAGTCACTACAGCAT 8353743 >seq6 Length=17716291 Score = 87.8 bits (96), Expect = 1e-11 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 518201 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 518260 || ||||| || ||||||| |||||| |||||||| || |||| ||||| |||||||| Sbjct 2160862 GGCTCATTGATGATTCTCATAACATTCAGACCAGCGATGGTTCCGGCATCCTTAGTGGCC 2160803 Query 518261 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 518306 || | || | ||| || || |||||||||||||| | || |||| Sbjct 2160802 TGGCGCTGGGCATCATTGAAGTATGCAGGAACAGTGACCACAGCAT 2160757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780546891471712